Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3463 |
Symbol | |
ID | 4257659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4108694 |
End bp | 4109602 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124148 |
Product | periplasmic solute binding protein |
Protein accession | YP_739501 |
Protein GI | 114048951 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCA ATTCTAATTT TGTTAAAGCG GCCGCAGCGG CCCTGTCTTT CGCTTGTTCA GGCTTTGCCC ACGCAGAGCT GAATGTGTTT GCCTGTGAAC CCGAATATGC CGCATTGGCA AAAGAGTTGG CTCCAAACGC CAGCATTTAT TCGGCAACCA CGGCCTTACA GGATCCGCAT CAAGTGCAGG CGCGTCCGAG TTTGATCGCC AAAATGCGCC AAGCGGATCT GGTGGTCTGT GCGGGCGCCG ATTTAGAAAT CGGTTGGTTG CCAATGCTGC AAATGAAGTC GGCTAACGCT AAGGTTCGCT CTACCGATCA GGGGCTGTTT TTCGCCGCCG ATCAAATCGA TACCTTAGAT AAGTTAGCGA GTGTAGATCG CAGCATGGGC GATGTGCATG CCCAGGGAAA TCCGCATATT CACTTCGATC CGACGCGTTT GCTAAGCGTC GCGAATGCGC TCAGCGCTAA GATGAGCCAA CTCGACCCGA GTGAGGAGGC GAATTACCAA AAGGCATTAG CGGACTTTAG CACTCGTTGG CAGGCGGCGA TCCCCCGCTG GGAAGAGCAG GCCAAAGCGC TAAAAGGCAA AAAGGTCATC GCCTATCACA CTAGTTTTAG ATATCTGTTC AACTGGTTGG GGATTGAACA AGCTGCTGAT CTTGAGCCTA AACCCGGTCT GGCACCGACT AGCGGCCATT TAGCCAGTTT GCTGAGCCGC GCCGAGCAGG GCGATATTCT GGCGGTAGTT GTGGCGTCAT ATCAGGATGA GCGTGGTGCT AAGTGGTTGG GTGAAAAGGC TAATCTACCA GTGCTTATGT TGCCAATGTC GGTAGGTGGC AACGATGCGA GTCAAGATCT CTTCAGCCTC TACGACAGCG CTATTGCCCT CTTAAACGGG GTGAAATAG
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Protein sequence | MRINSNFVKA AAAALSFACS GFAHAELNVF ACEPEYAALA KELAPNASIY SATTALQDPH QVQARPSLIA KMRQADLVVC AGADLEIGWL PMLQMKSANA KVRSTDQGLF FAADQIDTLD KLASVDRSMG DVHAQGNPHI HFDPTRLLSV ANALSAKMSQ LDPSEEANYQ KALADFSTRW QAAIPRWEEQ AKALKGKKVI AYHTSFRYLF NWLGIEQAAD LEPKPGLAPT SGHLASLLSR AEQGDILAVV VASYQDERGA KWLGEKANLP VLMLPMSVGG NDASQDLFSL YDSAIALLNG VK
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