Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3430 |
Symbol | |
ID | 4256702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4065137 |
End bp | 4066282 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638124111 |
Product | HflK protein |
Protein accession | YP_739468 |
Protein GI | 114048918 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0909026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0445873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGT AATGATCCTT GGGGAAATAA AGGTGGTAAC GACAAAGGAC CACCGGACCT TGATGAGGTT TTTCGTAATC TTTCAAAACG CTTTGGCGGC AAAGGCAATG GCTCATCAGG CCAGAACTTT AGTTCGTTTA GCGTAATCAT CATTCTTGCC ATCGCTTTTG TTGTTTGGGG ACTCTCGGGT TTTTACACCA TTAAAGAAGC TGAGCGTGGT GTCGCGCTGC GTTTTGGTCA GCATATTGGT GAAGTGGGCC CAGGTCTGCA TTGGAAAGCC ACTTTTATCG ACCAAATTTA CCCAGTTGAT GTGCAATCTG TCCGCTCCAT TCCTGCCTCA GGCAGTATGT TGACCTCAGA TGAAAACGTC GTAAAGGTAG AGTTGGACGT ACAGTATCGT ATTTTAGATG CGTACTCTTA TCTGTTCAGT GCCGTTGATG CCAATGCCAG CTTACGTGAA GCCACAGACA GTGCGCTGCG TTATGTCATC GGCCACAACA AAATGGACGA TATTCTAACC ACGGGTCGTG ATACCATTCG TCGCGATACT TGGAAAGAGT TAGAGCGCAT TATTGAGCCG TACAAATTAG GCTTAGCCAT TGTTGACGTT AACTTTTTGC CAGCGCGTCC GCCTGAAGAA GTGAAAGATG CTTTCGATGA TGCGATTGCG GCTCAAGAAG ACGAACAGCG CTTTATCCGT GAAGCAGAAG CTTATGCCCG TGAAGTTGAG CCTAAAGCGC GCGGTGAAGT CGAGCGTATG GCACAACAAG CCAATGCCTA TAAAGAACGT GAAGTTCTTG AGGCTCGCGG TAAAGTGGCT CGTTTCGAGT TGTTGTTACC TGAGTACCAG GCGGCACCTG AAGTGACCCG TAAGCGTTTG TATCTTGATG CAATGCAGCA GGTGATGACA GATACCAATA AAGTACTGAT CGACACAAAG AACAGTGGCA ACTTAATGTA TTTGCCCTTA GACAAGTTAA TGAAAGAGAA GCCTGTGACT ATGCCAGAGG CTGAGAATAA GTCTCAGCAG AATGTCAATT CTTCATCTAT GTCAACGACT CGCATCAGTG AGCCTTTGAG TGGACGTCCG TCTCGCGAGG ACCGTGCTCG CCAAGGGAGG GAGTAA
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Protein sequence | MAWNEPGNKG NDPWGNKGGN DKGPPDLDEV FRNLSKRFGG KGNGSSGQNF SSFSVIIILA IAFVVWGLSG FYTIKEAERG VALRFGQHIG EVGPGLHWKA TFIDQIYPVD VQSVRSIPAS GSMLTSDENV VKVELDVQYR ILDAYSYLFS AVDANASLRE ATDSALRYVI GHNKMDDILT TGRDTIRRDT WKELERIIEP YKLGLAIVDV NFLPARPPEE VKDAFDDAIA AQEDEQRFIR EAEAYAREVE PKARGEVERM AQQANAYKER EVLEARGKVA RFELLLPEYQ AAPEVTRKRL YLDAMQQVMT DTNKVLIDTK NSGNLMYLPL DKLMKEKPVT MPEAENKSQQ NVNSSSMSTT RISEPLSGRP SREDRARQGR E
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