| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3391 |
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| Symbol | |
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| ID | 4255005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4017223 |
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| End bp | 4019802 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638124073 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_739430 |
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| Protein GI | 114048880 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAG CAGCCAGAAA TGGAATATAT TTTATTCTGC TTTTTAACTT TAAAGCAGTG
TTGGCTGATG ATTACTTTAA TCCGGAGTTT ATTGAAGGGG GCGATGGTAA GTCGAAATCT
GTAGATCTTT CGCATTTTGA AAATATTGAC GGACAAATAC CTGGTAGGTA TTTTGTCCAG
ATATTTGTCA ATGGGGAAAG GAAAGAATCC ACAGAGATAG TTTTCTTTCA CTCACAAACT
AGTTCCGCAA AAGGAGATTT AACGCCTTGC CTTTCGCTGT CTCAGTTGAA ATCTTGGGGC
GTCAATGTCC CTAAGTTTTT CGAGGAGAGT GTATACAAGG CTGAATGCGT TGATTTAACA
AGGATTGATC AGGCTCTGAG TGTGTTCAAG ATGAACGACA TGAAACTGGT ACTGTCTTTT
CCGCAGTCCG CAATGACCAA TGTTGCCAGG GGGACGGTTA GTCCGAATCG TTGGGATGAT
GGCATTAACT CGTTTTTACT TAACTATGAT TTGACTGCAA ATAGCCGTTG GCAAAATCAA
ACCGGTCAAC GCACTGATAA TTACTATGTA AATTTGCGTC CGGGAATTAA CTTCGACGCC
TGGCGTATAA GAAGCAATAT CACTTGGTCT AAAAGCGTCA CCAACTGGTC TTCTGGCACC
GATGATCAAA ATGATGCTGA ATTCGACATT ATCTATAGCT ATGCCAGCAG AAGCTTTGCC
GGGCTGAAGA GCAGGCTCAC AGTTGGCGAT GCTTATACCT CAGCGGACAT TTTTAACAGT
GTCTCTTTTC GAGGCATCCA ACTTGAAAGT GACGAAGACA TGTTGCCTTA TAGCCTCAGA
GGTTATGCCC CTGTGGTGAG GGGAATAGCA CGCACGAACG CCGAAGTTCA AATTCATCAG
AATGGCAGAA AGATATACAG TACCTTTGTG TATCCGGGGA ACTTTGAAAT TTCAGACTTG
TTTGCGACCG CAGGTGGTGG AGATCTCACT GTGACCGTTG TTGAGTCAGA TGGAAATACT
CAACGCTATG AGGTGCCTTT TGCCTCCTTG CCTGTTTTGA GACGTGAGGG CAGCTTAAAA
TACTCTGCAA CTTCTGGCAT CTTCAGAAAT TCAGATGCAA GTGTTAACGA TGTCGCATTT
TCGCAGGGAA CTGTATCTTA TGGATTACCA AAAGGTCTCA CGCTATACGG TGGCGCACAG
TTCTCAAGCA AGTATCGCGC TGTTGCGGCA GGTCTTGGCA CCAATCTTGG CAAGCTTGGT
GCTATCTCAT TTGATGTTAC CAGATCATGG TCCGATTTTA TTGAGAGAGT CAGCGAGAGC
GGAAATTCTT ATAAGCTAAG ATACAGTAAG TATTTTTCAG AGTCGGGCAC CAACTTTTCC
ATGGCAGGCT ATCAATACTC TACCAAGGGG TATTGGGTTT TGTCTGATGT GCTCAATCAA
ACTTCTTACT ATGACGAATT GGCGCAGATA AGGTTTGACA TCCCCACTAC AAATAACCTT
TACACCAAAC CCAAACAACG GTTCGAATTG GTGCTAACCC AAGGCGCAGG AAGTTGGGGC
AGTCTGTCGG TGGCCGCAGC ATTCGAAGAA CATAGGGAGT CCAATCGCAA TATTCAGTCG
CTCAACACCA GCTACAATAA CTCTTTTGGT AGCCTCAGTT ATGGATTAGG GTTTTCTTAT
TCAAGTAGAA CAGCATTGAG TTTCAATGGG ATAACGTCCG TACAGGATAA GGACGACATG
ATTTTCTCAT TTAACATCAG TGCACCCATT GAAGAACTCT TTGGGGTGAG CCAGCCTGTA
TATTCCAGCA TGGCCTCTAG TATTAAATCC GGCGGTAGCG TGCGCAGTAA CGCCATAATC
AACGGCTCAA TGTTGGAGGG AAGGTCATTA AACTGGGGTT TGTATACCAG TTATGACGAC
CAATCCCATG ACTATGATGC TGGTGTCAAT TTGGATCTTA AGACCCGCTA TGGGGAATTT
AGTAGCGGTT TTGTTTATGA CTCCGGTGGG CGAAGGTTTA ACTATGGCGC CAGGGGCTCC
TTACTTGCCC ACTCCAATGG CGCGACTTTC GGCCAGCAGA TGGGTGAAAC AGTTGCGCTG
GTCGCCGTTC CTGACGTCGA GGATATTGCT ATCGAGAACC AGATTGGCAT TAAAACAGAT
GCCAATGGCT ATGCGATCCT TCCTTATGTA ACACCTTATC GCAATAACTT TGTGTCTCTA
GATCCCAGAA CATTTGGTCA CAATGTTGAA GTGAATGGCT CCGCTGCCAA GGCTGTACCA
ACCCGGGGTG CGGTAGTTCT GGTTGAATTT AACAGTCGTA TCGGTGAAAG AGCCTTAGTG
ACACTACAAA AATCCGATGG TAGCTATGTA CCTTTTGGGG CCACAGTAAT CCAATCTGAT
AATAACGATA AAATAAATAT TGTATCTGAC TTTGGACAGG TGTATTTGGC TGGCTTACCA
AAACAAGGAA CCCTGTTTGT AAAATGGGGA CGTGGGGATA ATGAGCAATG TCAATTTGAT
TATCAAATTC CAGATAAAAA AATAGAAAAA TTGAATTTTT TGAATGCTAT TTGTTTATAA
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| Protein sequence | MKLAARNGIY FILLFNFKAV LADDYFNPEF IEGGDGKSKS VDLSHFENID GQIPGRYFVQ
IFVNGERKES TEIVFFHSQT SSAKGDLTPC LSLSQLKSWG VNVPKFFEES VYKAECVDLT
RIDQALSVFK MNDMKLVLSF PQSAMTNVAR GTVSPNRWDD GINSFLLNYD LTANSRWQNQ
TGQRTDNYYV NLRPGINFDA WRIRSNITWS KSVTNWSSGT DDQNDAEFDI IYSYASRSFA
GLKSRLTVGD AYTSADIFNS VSFRGIQLES DEDMLPYSLR GYAPVVRGIA RTNAEVQIHQ
NGRKIYSTFV YPGNFEISDL FATAGGGDLT VTVVESDGNT QRYEVPFASL PVLRREGSLK
YSATSGIFRN SDASVNDVAF SQGTVSYGLP KGLTLYGGAQ FSSKYRAVAA GLGTNLGKLG
AISFDVTRSW SDFIERVSES GNSYKLRYSK YFSESGTNFS MAGYQYSTKG YWVLSDVLNQ
TSYYDELAQI RFDIPTTNNL YTKPKQRFEL VLTQGAGSWG SLSVAAAFEE HRESNRNIQS
LNTSYNNSFG SLSYGLGFSY SSRTALSFNG ITSVQDKDDM IFSFNISAPI EELFGVSQPV
YSSMASSIKS GGSVRSNAII NGSMLEGRSL NWGLYTSYDD QSHDYDAGVN LDLKTRYGEF
SSGFVYDSGG RRFNYGARGS LLAHSNGATF GQQMGETVAL VAVPDVEDIA IENQIGIKTD
ANGYAILPYV TPYRNNFVSL DPRTFGHNVE VNGSAAKAVP TRGAVVLVEF NSRIGERALV
TLQKSDGSYV PFGATVIQSD NNDKINIVSD FGQVYLAGLP KQGTLFVKWG RGDNEQCQFD
YQIPDKKIEK LNFLNAICL
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