Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3330 |
Symbol | |
ID | 4255199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3946155 |
End bp | 3946760 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124012 |
Product | hypothetical protein |
Protein accession | YP_739369 |
Protein GI | 114048819 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0277435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.808586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAACC CGAGATCCCT ACTCAATAGC CTGCGCCGTA AAACCATCTC ATCCACGAGT ATCACCTCAG CAACGGCGGC TAACTCGGCC ACGCCACAAC GCCAGCCAAA GCCACTGACA CCACTGCAGC AACAAATCTT GGTTCGCATC GAAGATTGTT ATCAGCAGGC GGAAATCTAC TTTAAGCGCC CATTTGCGCG GCCGCTGACT CAATTTACCC TGCGGGGACG GAGTGCGGGC ACGGCGCATT TGCAACAGAA TCGCCTGCGC TTTAATGCCG TATTACTCAG GGAAAACAGC GAAGCCTTTT TAGCCGAAGT AGTGCCTCAC GAAATAAGCC ATTTACTCTG TTTCCAACTC TTTGGCAAAA CCAAACCCCA TGGCCGCGAG TGGCAATCCA TCATGCTCAC GCTGTTTAAG GTGAGCCCCA ATACCACCCA CAGTTTCGAT ACTCAATCGG TTAAAGGGAA AGACTTTGAG TACCGCTGCG CCTGCGGTCC GGTTCGGTTG AGCATCCGTC GCCATAATAA AGTGTTGCGT GGTGAAACCC GTTATCTATG CAAACGCTGC CATACCCACC TCACCTTTAC CGAAGCCGCC GAATAA
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Protein sequence | MFNPRSLLNS LRRKTISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNAVLLRENS EAFLAEVVPH EISHLLCFQL FGKTKPHGRE WQSIMLTLFK VSPNTTHSFD TQSVKGKDFE YRCACGPVRL SIRRHNKVLR GETRYLCKRC HTHLTFTEAA E
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