Gene Shewmr7_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3330 
Symbol 
ID4255199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3946155 
End bp3946760 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID638124012 
Producthypothetical protein 
Protein accessionYP_739369 
Protein GI114048819 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.808586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACC CGAGATCCCT ACTCAATAGC CTGCGCCGTA AAACCATCTC ATCCACGAGT 
ATCACCTCAG CAACGGCGGC TAACTCGGCC ACGCCACAAC GCCAGCCAAA GCCACTGACA
CCACTGCAGC AACAAATCTT GGTTCGCATC GAAGATTGTT ATCAGCAGGC GGAAATCTAC
TTTAAGCGCC CATTTGCGCG GCCGCTGACT CAATTTACCC TGCGGGGACG GAGTGCGGGC
ACGGCGCATT TGCAACAGAA TCGCCTGCGC TTTAATGCCG TATTACTCAG GGAAAACAGC
GAAGCCTTTT TAGCCGAAGT AGTGCCTCAC GAAATAAGCC ATTTACTCTG TTTCCAACTC
TTTGGCAAAA CCAAACCCCA TGGCCGCGAG TGGCAATCCA TCATGCTCAC GCTGTTTAAG
GTGAGCCCCA ATACCACCCA CAGTTTCGAT ACTCAATCGG TTAAAGGGAA AGACTTTGAG
TACCGCTGCG CCTGCGGTCC GGTTCGGTTG AGCATCCGTC GCCATAATAA AGTGTTGCGT
GGTGAAACCC GTTATCTATG CAAACGCTGC CATACCCACC TCACCTTTAC CGAAGCCGCC
GAATAA
 
Protein sequence
MFNPRSLLNS LRRKTISSTS ITSATAANSA TPQRQPKPLT PLQQQILVRI EDCYQQAEIY 
FKRPFARPLT QFTLRGRSAG TAHLQQNRLR FNAVLLRENS EAFLAEVVPH EISHLLCFQL
FGKTKPHGRE WQSIMLTLFK VSPNTTHSFD TQSVKGKDFE YRCACGPVRL SIRRHNKVLR
GETRYLCKRC HTHLTFTEAA E