| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3320 |
|---|
| Symbol | napH |
|---|
| ID | 4255189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3930673 |
|---|
| End bp | 3931656 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638124002 |
|---|
| Product | quinol dehydrogenase membrane component |
|---|
| Protein accession | YP_739359 |
|---|
| Protein GI | 114048809 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.159981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACA AGTCTATGAA TAACCAGACC ATGAACTCAA AAGCCCGCAT GCAAGGCGAG
CATGCCGCAG CCATTGCAGA ACTCGGTTGG TTTGGCGCAC ACAAATATTT GCTACTACGC
CGCGCGGTGC AATTCGGCTT ATTAGGCTTA TTTGTACTTG GGCCATTACT GGGAATTTGG
CTATTTAAGG GTAATTTATC GGCAAGTTTA CTGTTCGATA CCATTCCCTT GGCCGATCCA
CTCGTGAGCT TACAAATGCT CATTAGCGGG CATATTCCCG AGCTTAGCCT ATTGATAGGT
GCCGCCTTGG TCATACTGTT TTATGCCCTC GCCGGTGGCC GGGTGTTTTG CAGTTGGGTG
TGTCCGGTCA ATCTGGTAAC TGACACAGCA AGCTGGCTCA GACGTAAATT GAACCTTCCT
CGCACCAGCG AGTTACCACG CAATTTACGT TATTACCTAC TGGCACTCGT GCTGTTATTG
CCACTGCTCA CGGGCAACTT GATTTGGGAG TGGGTTAACC CAGTTCCCTT AGTCTATCGC
GCCGTGTTAT TTGGCAGTCT CAGTGGTTTA TGGATCTTAG CGGCGATATT TATGCTGGAT
CTGTTTATCG CCGAGCGCGC TTGGTGTGGT CACCTGTGTC CAACAGGCGC CCTATTTGGC
TTAATCGGCA AATGGAGCCC CATCAAAATC GTTGCCAGCA AAGCCAGTGC CTGTGATAAC
TGCATGGATT GCTTTGCCGT TTGCCCTGAA CGCCAAGTAT TAAAGCCGGC GTTAAAAGGG
CAAAACCCGG TGATCACTAG CCCAGACTGC ACCCAATGCG GCCGCTGTAT CGATGTCTGC
GCACAACGCG TATTTCGCTA TCAAACACGC TTTACGGCCA CTCAGGCTCA ACTTAGTAAA
GGCGATTCGA CCGATTGTCA GTCGCCATCA ACCACTTCAC CAATTCGTCA ACACATTGCC
CCCAAGGCGG AGAATGACCA ATGA
|
|---|
| Protein sequence | MSNKSMNNQT MNSKARMQGE HAAAIAELGW FGAHKYLLLR RAVQFGLLGL FVLGPLLGIW
LFKGNLSASL LFDTIPLADP LVSLQMLISG HIPELSLLIG AALVILFYAL AGGRVFCSWV
CPVNLVTDTA SWLRRKLNLP RTSELPRNLR YYLLALVLLL PLLTGNLIWE WVNPVPLVYR
AVLFGSLSGL WILAAIFMLD LFIAERAWCG HLCPTGALFG LIGKWSPIKI VASKASACDN
CMDCFAVCPE RQVLKPALKG QNPVITSPDC TQCGRCIDVC AQRVFRYQTR FTATQAQLSK
GDSTDCQSPS TTSPIRQHIA PKAENDQ
|
|---|
| |