Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3318 |
Symbol | |
ID | 4255187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3927410 |
End bp | 3929890 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124000 |
Product | nitrate reductase catalytic subunit |
Protein accession | YP_739357 |
Protein GI | 114048807 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA GCCGCCGCGA GTTTCTCAAG GCTAACGCAG CGGTTGCCGC TGCCACAGCC GTTGGCGTCA CGCTTCCCGT GAAGATGGTC GAAGCTGCCG AGTCAGATAA TATTAAGTGG GATAAAGCGC CCTGCCGTTT TTGCGGTGTG GGTTGTAGCG TATTAGTTGG TACCAAAGCG GGTAAAGTGG TCGCCACTAA GGGCGATCCT GAAAGCCCTG TTAACCGTGG TTTGAACTGT ATTAAGGGTT ACTTCCTGTC GAAAATCATG TACGGCAAGG ACAGATTAAC CACGCCGCTG CTGCGGATGA AAGATGGCAA ATACCACAAA GAAGGCGAAT TTACCCCAGT TAGCTGGGAT GTCGCCTTAG ATACTATGGC CGCTAAGTGG AAACACAGCA TCGCCACTAA GGGACCAACC TCGGTCGGTA TGTTTGGCTC TGGCCAGTGG ACCATTTGGG AAGGTTATGC CGCCTCTAAA TTACATAAGG CCGGTTTCCT CACTAACAAT ATCGACCCTA ACGCCCGCCA CTGTATGGCA TCGGCCGTAG GTGGCTTTAT GCGTACCTTC GGTATCGACG AGCCTATGGG TTGTTACGAT GACTTAGAAG CCGCCGATCA CTTTGTGCTC TGGGGCGCCA ACATGGCCGA GATGCACCCG ATCCTGTGGG CGCGTTTATC CGACCGCCGC TTAAGCCACA AAGACAGTCG CGTACACGTA CTCTCCACCT TCGAGAACCG CAGCTTCGAC TTAGCGGACA ACCCTATGGT GTTCCGCCCA CAGTCAGACT TAGTGATCCT CAACTTTATT GCTAACTACA TCATTCAAAA CAAAGCCGTG AATACCGACT TTGTGACTAA GCATACTAAG TTTGCCCTCG GTGTGGATGA TATAGGTTAT GGTCTGCGTC CAGATCATCC GTTAGAGAAG AAAGCTAAAA ACCCAGGCAA TGGTAAATCC AGCCCTATCA GCTTCGAAGA ATACGCTAAG TTCGTCAGCA CTTATACGCT GGAATATGCG GCGAAGATGA GTGGTGTAGA ACCTGAAAAA TTAGAAACCT TAGCTAAGGC CTATGCCGAT CCTAAGGTCA AAGTCATGAG TCTGTGGACC ATGGGCATCA ACCAACACGT ACGTGGCGTG TGGGCAAACA ACATGCTCTA CAACATCCAC TTACTCACAG GTAAAATCGC CACTCCAGGT AACAGCCCAT TCTCATTAAC GGGTCAACCT TCGGCCTGTG GTACTGCCCG TGAAGTCGGC ACCTTCGCCC ACCGCTTACC TGCAGATATG GTAGTGGCTA ACGATGCACA CCGCGCCATC ACCGAAAAAG TGTGGCAGGT ACCAGAAGGC ACCATTCCGC CAAAACCAGG CTTCCATGCC GTGCTGCAAA GCCGCATGCT CAAGGACGGT AAACTCAACT GCTATTGGAC CATGTGTACC AACAATATGC AGGCGGGTCC GAATATCAAC GATGAAATCT ACCCCGGTTT CCGTAACCCA GAAAACTTTA TCGTGGTATC CGATCCATAC CCAACCGTTA CCGCCATGGC CGCCGACTTA ATCCTGCCTA CCGCCATGTG GGTAGAAAAA GAAGGAGCCT ATGGTAACGC CGAGCGCCGC ACCCATATGT GGCATCAACA GGTCAAAGCG CCAGAAGGGG CTAAATCGGA TCTGTGGCAA TTAGTCGAGT TTTCAAAACG CTTTAAAGTG TCTGAAGTGT GGCCTGCTGA GCTTATCGCC AAGCAACCTG AATACGCTGA CAAAACGCTT TATGAAGTGC TGTTTGCCAA CGGCGTTATC AACAAGTTCC CAACCACAGA TTGTAAGGGC GACTTAAACG ATGAAAGCGC GCACTTTGGC TTCTATCTAC AAAAAGGCAT TTTCGAAGAA TACGCCGCCT TCGGTCGCGG CCATGGTCAT GACTTAGCCG ACTTCGACCG TTACCACGAA ACCCGCGGTC TACGCTGGCC TGTGGTTGAA GGCAAAGAAA CCCTGCGCCG CTTCGTTGAA GGTAGCGATC CTTATGTGAA GGCAGGTGAA GGCTACAAGT TCTACGGCAA ACCCGATGGC AAAGCGGTGA TTTTCGCCCT GCCCTACGAG CCTGCGGCAG AAGAGCCAAA TGAAGAATAC GATCTGTGGA TGTCTACCGG CCGTGTACTC GAACACTGGC ATACAGGTTC GATGACAGCC CGTGTACCTG AGCTGTACCG CGCTTACCCC GATGCACAAA TCTTTATGCA TCCTGAAGAC GCTAAGGCCC GAGGTCTGCA ACGTGGTGAT GAAGTGCTAG TCGCATCCCC CCGTGGTGAG GTCAAAACCC GTGTCGAAAC CAAAGGCCGT AACAAACCGC CACGCGGTGT GGTGTTTATG CCCTTCTTCG ATGCGCGTCA GTTAGTTAAT AAGTTGATTC TGGATGCGAC CGATCCACTG TCAAAAGAAA CTGACTTTAA GAAGTGTCCC GTAAAAGTGA TGAAGGCCTA A
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Protein sequence | MSISRREFLK ANAAVAAATA VGVTLPVKMV EAAESDNIKW DKAPCRFCGV GCSVLVGTKA GKVVATKGDP ESPVNRGLNC IKGYFLSKIM YGKDRLTTPL LRMKDGKYHK EGEFTPVSWD VALDTMAAKW KHSIATKGPT SVGMFGSGQW TIWEGYAASK LHKAGFLTNN IDPNARHCMA SAVGGFMRTF GIDEPMGCYD DLEAADHFVL WGANMAEMHP ILWARLSDRR LSHKDSRVHV LSTFENRSFD LADNPMVFRP QSDLVILNFI ANYIIQNKAV NTDFVTKHTK FALGVDDIGY GLRPDHPLEK KAKNPGNGKS SPISFEEYAK FVSTYTLEYA AKMSGVEPEK LETLAKAYAD PKVKVMSLWT MGINQHVRGV WANNMLYNIH LLTGKIATPG NSPFSLTGQP SACGTAREVG TFAHRLPADM VVANDAHRAI TEKVWQVPEG TIPPKPGFHA VLQSRMLKDG KLNCYWTMCT NNMQAGPNIN DEIYPGFRNP ENFIVVSDPY PTVTAMAADL ILPTAMWVEK EGAYGNAERR THMWHQQVKA PEGAKSDLWQ LVEFSKRFKV SEVWPAELIA KQPEYADKTL YEVLFANGVI NKFPTTDCKG DLNDESAHFG FYLQKGIFEE YAAFGRGHGH DLADFDRYHE TRGLRWPVVE GKETLRRFVE GSDPYVKAGE GYKFYGKPDG KAVIFALPYE PAAEEPNEEY DLWMSTGRVL EHWHTGSMTA RVPELYRAYP DAQIFMHPED AKARGLQRGD EVLVASPRGE VKTRVETKGR NKPPRGVVFM PFFDARQLVN KLILDATDPL SKETDFKKCP VKVMKA
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