Gene Shewmr7_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3290 
Symbol 
ID4255247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3893922 
End bp3895214 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content53% 
IMG OID638123973 
Productaminopeptidase B 
Protein accessionYP_739330 
Protein GI114048780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0811496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC TTAAAGTGAC TGAAGTGATG AGAGTTGAGT TAACCAAAGA TACCCCCGCA 
GCCCATTGGG GCAAAGCCGA TGTGACCTTC AATGCCGAAG GCGCATTAGT CCACTTAGGT
GGTGGCGATG AGCTGCGCCA AATTCAAATG GCGGCGCGTA AATTACGCAA TCAAGGGATC
AGCACTGTTG CCTTAGCAGG ATCTCTTTGG GATCTGAATA GCCAATGGGT CTTCGCCCAA
GGTTTTGCCA CAGCCAAACC CGGTTATAAG ATCCAATGGT GCGGCGATGA CGCAGTACAA
GCCGAATTAC AACGTCGCTT AGAAGTGGCG ACATTTGCCC GTCAACTGAT CAACGACACC
CCTGAAAATC TGTCTCCGGT GAAACTGGCG CAGCAAGCGG CCAAATGGTT AGCCGATATC
GGTGGCGCTA AGGTGAGCTA CCGTATTATT GAAGGCGAAG CATTATTAGA AGAGCAATGG
ATTGGTATCC ATGCCGTAGG CCGTGGCAGC GAGCGTCCAC CAGCGATGTT AGAGCTAGAC
TTTAACCCGC TGCCAGCCGA TGCCCCAGTA TCTGTTGCCT TAGTCGGTAA AGGTATTACC
TTCGACTCAG GCGGTTATAG CATTAAAGCC TCTGAAGGCA TGCTGGGCAT GAAGTGCGAT
ATGGGCGGCG CCGCAACGGT TACCGCAGCA CTGGGCCTTG CGATTAAATC GGGCCTGAAC
AAACGCGTTA AGTTATTCCT CTGCTGCGCA GAAAACCTCA TTAGCGGCCG CGCCTATAAG
TTGGGTGATA TCCTCACTTA CAAAAATGGC GTGACAGTCG AAGTGGTTAA CACCGATGCT
GAAGGTCGTT TAGTGCTGGC CGATGGTCTG CAAGCGGCTT CTGCGACGGG TGCACCTTTT
ATTATCGATG CGGCAACCTT AACTGGCGCA GCTGTGATGG CGGTGGGCTC TAACTACAAC
GCGATTTTCT CGCCTCAGAC TGAAGTGTTA CAGCTGGCGC AGCAAAAGGC GTCGACAGTG
GCCGAGCGTG TATGGCCATT GCCATTGGAT CCTTGGCACA AAGACATGTG CCCATCTGCC
TATGCAGATA CCGCAAACAG TCGCCCTGTA AAAGGTGGTG GTGCAGGTGG TGCCTCGAAT
GCGGCGGGCT TCCTGTGGCG TTTCGTTTCG CCAGAAGCGA AATGGTTACA CGTTGATTTA
GCGGCGGCCT TCGAAGATTC GGCTTCTGCA CTATGGGGCG CAGGTGCGAC CACCCATGGC
GTGCTGACCA TCAGCGAACT GATTAAAGGT TAA
 
Protein sequence
MSELKVTEVM RVELTKDTPA AHWGKADVTF NAEGALVHLG GGDELRQIQM AARKLRNQGI 
STVALAGSLW DLNSQWVFAQ GFATAKPGYK IQWCGDDAVQ AELQRRLEVA TFARQLINDT
PENLSPVKLA QQAAKWLADI GGAKVSYRII EGEALLEEQW IGIHAVGRGS ERPPAMLELD
FNPLPADAPV SVALVGKGIT FDSGGYSIKA SEGMLGMKCD MGGAATVTAA LGLAIKSGLN
KRVKLFLCCA ENLISGRAYK LGDILTYKNG VTVEVVNTDA EGRLVLADGL QAASATGAPF
IIDAATLTGA AVMAVGSNYN AIFSPQTEVL QLAQQKASTV AERVWPLPLD PWHKDMCPSA
YADTANSRPV KGGGAGGASN AAGFLWRFVS PEAKWLHVDL AAAFEDSASA LWGAGATTHG
VLTISELIKG