Gene Shewmr7_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3265 
Symbol 
ID4255135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3868611 
End bp3869591 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content50% 
IMG OID638123948 
ProductMarR family transcriptional regulator 
Protein accessionYP_739305 
Protein GI114048755 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases
[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAC TTTGGTTAAC CCTGATGGCA TTCAATCCGA CTATGGCAAA TGATCCCGGC 
TCATCTAGCC AACTGAGACA CCTTTCCCGC TATATGGTCA GACACTTAGG CATGCTCAAT
GCGGCCTTTG GCGATTTACC TCTGTCCCCA GTACAGGCCC ACGCCTTGTT TGAGATAGGC
AATCAACCGC AAACCATTAA GGAACTCGCC TGCAAACTGA GCATAGATAA ATCCAATGCC
AGCCGCGCAA TCAAGCACTT AGTCGATAAA AACCTCGCCC AGAGCCAAAT GCATCCGCGG
GATAATCGCT GTCTCGTCGT TCAACTGACT CCTGCGGGTA AAAAGCTGCT CGCAAAATTA
GATAGCCAGC AAAATCAACT CTTTCAAGAA ATCTTGGCTC AGCTGACCCC TGAGCAAATT
CAACAAATCG AGCAAGCTCT TATGCAATAC AACCAAGCCA TACATAAAGC CAAACAACAA
TCGGGTTATC TTATCCGTGA AGCGACCGCC GCCGATGATG CTGCCATTGC CCAAGTGATC
CGCGCAGTTT CCGCCGAATA CGGCTTAACC GCGGATAAAG GCTATAGCGT GGCCGACCCA
ACCTTAGATT GTTTAAGCCA AATCTATTCG CAGCCGGGCG CCCAATACTG GGTGATAGAG
CATGAAGGCC AAGTGGTTGG CGGCGCAGGC ATAGCGCCAC TGGCTAACAA TGCCGGTATT
TGTGAACTGC AAAAAATGTA CTTTATACCC GAGATCCGTG GTAAAGGCTT AGCCAAACGT
TTAGCACTGC TGGCTCTAGA CTTCGCCCGT GGAGCGGGTT ATCAGAGCTG CTATCTCGAA
ACCACCGCAT TACTCAAAGA GGCCCTAAAG CTCTACGAAC ACTTAGGGTT TAACTACTTA
AGCGCCCCAC TTGGTAATAC TGGCCACGAC GCCTGTGAAA TCCCAATGCT ATTACCACTG
CACGCCGAAC TGAATGAATA G
 
Protein sequence
MAQLWLTLMA FNPTMANDPG SSSQLRHLSR YMVRHLGMLN AAFGDLPLSP VQAHALFEIG 
NQPQTIKELA CKLSIDKSNA SRAIKHLVDK NLAQSQMHPR DNRCLVVQLT PAGKKLLAKL
DSQQNQLFQE ILAQLTPEQI QQIEQALMQY NQAIHKAKQQ SGYLIREATA ADDAAIAQVI
RAVSAEYGLT ADKGYSVADP TLDCLSQIYS QPGAQYWVIE HEGQVVGGAG IAPLANNAGI
CELQKMYFIP EIRGKGLAKR LALLALDFAR GAGYQSCYLE TTALLKEALK LYEHLGFNYL
SAPLGNTGHD ACEIPMLLPL HAELNE