Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3258 |
Symbol | |
ID | 4256950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3860440 |
End bp | 3860856 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123941 |
Product | protein of unknown function DUF306, Meta and HslJ |
Protein accession | YP_739298 |
Protein GI | 114048748 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAAAC AAACATTTCT ATTAAGCGCA TTACTTTTTG GCTTAACCGC TTGTCAGAGC ACTGACGTTG CCAATCAAGA CACAGTGCCA TTACAGGGAA GCTGGCATAT TGAAGCCGTT CAAGGGCAAC CCACAGTGGA TTACAGCCCT GCGCAAATTA CCTTCGCCGA TGAAGGTAAA CTCTCTGGCA ATAACAGCTG CAACAACTTT TTTGGTCAAT ATAGCCAACA GGGACAGGAG CTAAAAATCA TTCCTGGCGG CAGCACGATG AAGGCCTGCG TCGATGCGCT GATGCAGCAG GAGCATAAAG TGATGCAAGC CCTGCCGTTG GTCGCTAAGG CCAAGCTAGT GCAAGGTCGT TTAACTCTGC TTAGCAGCGA CGATAAGCCC GTCCTTGTCC TAAGCCAGCT TAAATAA
|
Protein sequence | MLKQTFLLSA LLFGLTACQS TDVANQDTVP LQGSWHIEAV QGQPTVDYSP AQITFADEGK LSGNNSCNNF FGQYSQQGQE LKIIPGGSTM KACVDALMQQ EHKVMQALPL VAKAKLVQGR LTLLSSDDKP VLVLSQLK
|
| |