| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3250 |
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| Symbol | |
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| ID | 4256942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3851712 |
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| End bp | 3853706 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123933 |
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| Product | transketolase |
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| Protein accession | YP_739290 |
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| Protein GI | 114048740 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.456833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC GTAAAGTACT CGCCAACGCA ATCCGTGCGT TAAGTATGGA TGCAGTTCAA
AAAGCAAACT CAGGCCACCC TGGCGCCCCA ATGGGCATGG CAGATATTGC TGAAGTGCTG
TGGAATGATT TCCTTAAGCA CAATCCGAAC AATCCGAAAT GGGTAGATAG AGATCGTTTT
ATCCTCTCTA ACGGTCACGG ATCTATGCTG ATCTACTCTT TATTACACCT GACTGGCTAC
GACCTGCCTA TCGATGAACT GAAGCAATTC CGTCAGTTAC ATTCAAAAAC TCCGGGTCAC
CCAGAATACG GTTACACCCC AGGTGTTGAA ACCACCACAG GCCCATTAGG GGCGGGGATC
AGCAACGCTG TGGGTATGGC GATTGCAGAA AAAACCTTAG CGGCACAGTT TAACCGTGAA
GGTCACGAGA TTGTTGACCA CTACACTTAC TGCTTCCTCG GCGATGGCTG CTTGATGGAA
GGTATTTCCC ACGAAGCTTG TTCTCTGGCT GGTACCTTAG GCCTAGGCAA ACTGATCGCA
TTTTGGGATG ACAACGGCAT ATCTATCGAC GGTCATGTTG AAGGCTGGTT TACCGATGAC
ACTCCAAAAC GTTTCGAATC ATACGGCTGG CATGTGATTG CTAACGTTGA TGGTCACGAT
AGCGATGCGA TTCGCGCGGC TATCGAAGCG GCAAAAGCGG TGACCGACAA GCCAACCATG
ATCTGCTGCA AAACCATTAT CGGTTTTGGT TCACCAAACA AATCTGGTAG CCACGATTGC
CACGGCGCGC CATTAGGTGA TGCGGAAATC GCAGCGGCCC GTGAATTCTT AGGCTGGCCA
CATGCGCCAT TCGAAATCCC TGCCGACGTA TACGCAGGTT GGGATGCTAA AGAAGCCGGT
AACGCCCGTG AAGCAGCATG GAATGACAAG TTTACCGCTT ACGCGAAAGC TTACCCAGAA
CTGGCTGCCG AATACGAGCG CCGCGTTCTG AAAGGTGAAT TACCAGCAGA TTTCGAAGCC
AAAGCACAAG CCTTTATCCA AGAATGCCAA GCGAAAGGCG AAGGCATTGC GAGCCGTAAA
GCGTCACAAA ACGCGATTGC AGCCTTCGGT GCGGTTCTGC CTGAACTGTT AGGCGGCAGT
GCTGACTTAG CGGGTTCTAA CCTGACCTTG TGGGCAGGTT CTAAAGGCAT TCAAGAAGAT
CCAGCGGGTA ACTACGTGTA CTACGGTGTG CGTGAGTTCG GTATGAGCGG CATCATGAAC
GGTGTGTCAC TCCACGGTGG TTTCATCAAC TACGGCGCGA CTTTCATGAT GTTCATGGAA
TACGCACGTA ATGCAGTACG TATGTCTGCG CTGATGGGCA TTCAAAACAT CTTCGTTTAT
ACCCATGACT CTATCGGTCA AGGTGAAGAT GGTCCAACTC ACCAACCAGT TGAGCAATTA
GCTAACCTGC GTATGACGCC AAATATGGCG GTATGGCGCC CATGTGACGC TGCTGAAACT
GCAGTGGCTT GGAAAGCGGC TATCGAACGT CGTCATGCAC CAACATCGCT AGTATTCAGC
CGTCAAAACC TGAAGGCTCA CGCACGTACT GCTGAGCAAT TAGCGAATGT GGCAAAAGGC
GCTTACGTAC TGCAAGACTG TGCAGGTACA CCTGAGTACA TCCTGATTGC GACCGGTAGT
GAAGTGCAAT TAGCGGTAGA AGCTGCAGCT GCGCTGACCG AACAAGGCAA ACAAGTTCGC
GTTGTTTCTA TGCCATCAAA CACTGAGTTT GATAAGCAAG ATGCTGCTTA CAAAGAATCT
GTACTGCCAA AAGCTGTGAC TAAGCGTATC GCTATCGAAG CGGCCCATAC TGACTTCTGG
TACAAGTATG TTGGTTTCGA AGGCACTGTT GTTGGCATGA CCACTTTCGG TGAGTCTGCG
CCAGGCAACG TGCTGCTGAA GCACTTCGGT TTCACCGTTG AAAATGTGCT GAATGCTGCA
AAATCACTAG GCTAA
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| Protein sequence | MSSRKVLANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WNDFLKHNPN NPKWVDRDRF
ILSNGHGSML IYSLLHLTGY DLPIDELKQF RQLHSKTPGH PEYGYTPGVE TTTGPLGAGI
SNAVGMAIAE KTLAAQFNRE GHEIVDHYTY CFLGDGCLME GISHEACSLA GTLGLGKLIA
FWDDNGISID GHVEGWFTDD TPKRFESYGW HVIANVDGHD SDAIRAAIEA AKAVTDKPTM
ICCKTIIGFG SPNKSGSHDC HGAPLGDAEI AAAREFLGWP HAPFEIPADV YAGWDAKEAG
NAREAAWNDK FTAYAKAYPE LAAEYERRVL KGELPADFEA KAQAFIQECQ AKGEGIASRK
ASQNAIAAFG AVLPELLGGS ADLAGSNLTL WAGSKGIQED PAGNYVYYGV REFGMSGIMN
GVSLHGGFIN YGATFMMFME YARNAVRMSA LMGIQNIFVY THDSIGQGED GPTHQPVEQL
ANLRMTPNMA VWRPCDAAET AVAWKAAIER RHAPTSLVFS RQNLKAHART AEQLANVAKG
AYVLQDCAGT PEYILIATGS EVQLAVEAAA ALTEQGKQVR VVSMPSNTEF DKQDAAYKES
VLPKAVTKRI AIEAAHTDFW YKYVGFEGTV VGMTTFGESA PGNVLLKHFG FTVENVLNAA
KSLG
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