Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3246 |
Symbol | |
ID | 4256938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3847115 |
End bp | 3847852 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123929 |
Product | hypothetical protein |
Protein accession | YP_739286 |
Protein GI | 114048736 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0192004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG TACTGACCGC AGCACTATTA ATGACGGCAC CATTTATGGC GAATGCGGGA GCCGATTTTG TTAAAGGCGA TAGGACATTC GCAGGCGAAG CCGAGTTAGG TGCAACCTTA ACCACAGGTA ACACCGATAC CTCATCCTAT AAGGGTCGCT TAAGCCTTAA ACATGAATTG GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTGTATA AAGAAGATAC GGGTGAAGTG ACCGCTAAGC GTTATTTAGC GGGCGCACAG GGTAACTATA AAATGACAGA TCGCAGCTAT CTGTTTGCCA ACGCTAACTA TGAAGTTGAC CCTTTTACCG GTTATGACTA TACAGCCTCT GGGGCCGCGG GTTATGGTCA CAGACTCTAT GACACCAGCA AAACATTTTT AGATGTGGAA ATCGGTCCCG GTTACATCTA TCAGCGCCTC GATTCAGAGC AAGCGCTGTT AGAAGGCACA GATTCGAATG ACAGTGTGGT TGCCCACGGC GTGATCAACT TCGAAACTGA AATCACTGAA ACCTCAAAAT TCCAGCAACG TTTTGTGGCC GACTACGGCG ATAAATTGGA TGCGCGTTCA GAAACCTCGC TGACAGCCAA TATCATTGGC GCCTTGGCGA TGAAGTTTGC GATTATTGTG CGCTACAACA GTGAGCCACT GGACGATAAA AAGAGCACTG ATACCGAAAC GAATATGACC TTGCTCTATT CGTTCTAA
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Protein sequence | MKKVLTAALL MTAPFMANAG ADFVKGDRTF AGEAELGATL TTGNTDTSSY KGRLSLKHEL GDWENQYLLE GLYKEDTGEV TAKRYLAGAQ GNYKMTDRSY LFANANYEVD PFTGYDYTAS GAAGYGHRLY DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT LLYSF
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