| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3228 |
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| Symbol | |
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| ID | 4255729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3821705 |
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| End bp | 3822607 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123911 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_739268 |
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| Protein GI | 114048718 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.302685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAA CCTATCAGTG CGATCCGCTT ATCGATGCCT TTCTCGATGA TCTTTGGTCC
AGCAAGGGCT TAAGTGATAA CACCTTGAGT GCCTATCGCA CCGATTTACG CCATTTTGAC
CGCTATCAGC AGAGCCAAGG CCTGCGGTTA ATCGAGGTGG GGCAAGCCGA TGTGCGCGCC
TATTTAGCCT ACCGAGTCCA ACAACAATTT GCCCGCACCA GTAGCGCACG TCTACTTAGC
AGTTTACGGC GCTTTTACAC TTATTTATTG CAAACCAAGC AGATTGCTGG CGATCCTATG
GCGCTGATCG AATCGCCCAA ATTGAGTCGG CAATTGCCAG ATTCCTTAAG TGAGTCACAG
GTCGATAGAT TGCTGGCCGA GCCCAATGTG GACGACCCAG TTGAGTGCCG TGATAAAGCC
ATGCTTGAAC TCTTATACGC CACTGGATTG CGGGTGAGTG AACTGGTGGG GCTCACTATG
GAACAGATGA GTTTGCGCCA AGGTTTAGTA CGGATTGTGG GTAAGGGCGG TAAAGAGCGG
TTAGTGCCCA TGGGCGAGCT GGCCATTACC GAGGTTGAAC GCTACTTAAG CTTTGCGCGC
CACGAGCTCT TGGGCAATAT TCAGTCCGAT GTGGTATTTC CATCTAAGCG CTCGCAGATG
ATGACGAGGC AAACCTTTTG GCATCGGATC AAGCTCTATG CGAGCCGCGC CGGCATCGAA
ACTGAACTCT CACCCCATAC TCTGCGCCAT GCCTTTGCCA CCCACTTACT CAACCATGGC
GCCGACCTTA GGGTGGTACA ATTACTCTTA GGTCACAGTG ACTTATCGAC GACTCAAATT
TATACCCATG TGGCGCGAGC GAGATTACAA GAGTTGCACC AACAGCATCA TCCTCGTGGT
TAA
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| Protein sequence | MAKTYQCDPL IDAFLDDLWS SKGLSDNTLS AYRTDLRHFD RYQQSQGLRL IEVGQADVRA
YLAYRVQQQF ARTSSARLLS SLRRFYTYLL QTKQIAGDPM ALIESPKLSR QLPDSLSESQ
VDRLLAEPNV DDPVECRDKA MLELLYATGL RVSELVGLTM EQMSLRQGLV RIVGKGGKER
LVPMGELAIT EVERYLSFAR HELLGNIQSD VVFPSKRSQM MTRQTFWHRI KLYASRAGIE
TELSPHTLRH AFATHLLNHG ADLRVVQLLL GHSDLSTTQI YTHVARARLQ ELHQQHHPRG
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