Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3195 |
Symbol | pbpG |
ID | 4256224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3779545 |
End bp | 3780501 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123879 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_739236 |
Protein GI | 114048686 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000307926 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCC CTTCTCTGCT TGGTAGTTTT ATCTTGGTAT GCAGCAGTTT AACTGTTGCC GCGACAGCGC ATTCTGCCGA TTCGGCCTCT GTCACTACAA AAAGCACCGC CACGGCGAAA AAAAAACCTG CAAAACAGCA GGAAGTGGCC GCCAATAGTG CGCTGGTGGT GGATCTAAAA ACCAACGAAA TTCTCTATTC CAGTAATCCC GATGCCGTAA GGCCTATAGC CTCTGTGACT AAGCTGATGA CCGCCATGGT GACCTTAGAT GCTAAGTTAC CTATGGATGA AAAGCTTGCC ATCAATATCA ATGACACTAA GGAAATGCGC GGTGTCTACT CTCGAGTGCG TATCGGCAGT GAAATTAGCC GTAAAGATAT GTTATTGCTG ACATTAATGT CATCAGAAAA CCGTGCGGCG GCGAGTCTTG CCCACCATTA TCCCGGTGGT CATAAGGCCT TTATTAAGGC GATGAACGCT AAGGCAAAAT CCCTAGGTAT GAAGAATACT CGTTATGTGG AGCCGACTGG GCTGTCAGAG AAAAACGTTT CGAGTGCCCG CGATCTGGTG GTGTTACTCA AGGCCAGCGA AGGCTATCCC ATGTTAGGTC AGTTAAGCTC GACCGAAAAG AAAACCGTCA CCTTTGGCAA ACCTAAGTAC AGCCTCGACT TTAGAAACAC TAACCGTTTG GTTTACAAAG ATAACTGGAA CATTCACCTC ACTAAAACTG GCTTTACCAA TGAAGCAGGC CATTGTTTAG TGATGCGTAC CGAAATGGCT AAACGCCAAG TGGCCTTTGT GGTGCTCGAT GCCTATGGTA AATACACCCA TATGGCGGAT GCTAACCGTT TACGTAACTG GTTAGAAACA GGAAAAGTGA CTCCTATCCC TGCCGAAGCT AAGCAGTATA AAAAGCAGCG CAGCCAACAG CAGTTTGCCA AAGTCAGCGA GACCTAA
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Protein sequence | MKIPSLLGSF ILVCSSLTVA ATAHSADSAS VTTKSTATAK KKPAKQQEVA ANSALVVDLK TNEILYSSNP DAVRPIASVT KLMTAMVTLD AKLPMDEKLA ININDTKEMR GVYSRVRIGS EISRKDMLLL TLMSSENRAA ASLAHHYPGG HKAFIKAMNA KAKSLGMKNT RYVEPTGLSE KNVSSARDLV VLLKASEGYP MLGQLSSTEK KTVTFGKPKY SLDFRNTNRL VYKDNWNIHL TKTGFTNEAG HCLVMRTEMA KRQVAFVVLD AYGKYTHMAD ANRLRNWLET GKVTPIPAEA KQYKKQRSQQ QFAKVSET
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