| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3135 |
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| Symbol | |
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| ID | 4255110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3713226 |
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| End bp | 3714692 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123819 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_739176 |
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| Protein GI | 114048626 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTA CACAGCCCGC CGCAATGCCC TTGGATAAAC ATTTTCTGCC AGAGAACCAG
CTACTGCTCA ATGCCGTGGG TGAAGGCATT TATGGGTTTG ATTTAAATGG TAATGCCGTC
TTCATCAATC CCGCCGCCGA GCGCATGACG GGCTGGAAGA ATGAAGAATT ACTCGGCAAA
AATATCCATA ATTGCCATCA TCATAGCCAT GCAGATGGCA GTCATTATCC CCAAGAAGAT
TGTCCCATCT ACAACACCTT GAAGGATGGA ATAGCAAGGG AAATCACCCA CGATGTGTTT
TGGCGCAAAG ATGGCAGTAG CTTTCCAGTG CATTACAGCT CGACCCCCGT CTATCGGGAC
AACAAGCTTA TCGGCGTAGT CGCGATATTT CGCGACATCA GTATTCAGAA ACAAACCGAG
CAGTCGCTAC GTCAAGCTTT AGCACAGGTT CAAGCCCTGT CGGAGCAACT GGCCAGCGAG
AATCACTATC TCCAAGCCGA GTTAGCCGAT AAGACCGGCG ATGTGGATAT TTCGGGCAGC
AGCGCGGTGA TCCGCCATAT GATCAAGCAG CTGCATATGG TGGCCAATAC TGACAGTACC
GTATTGATTT GTGGTGAAAA TGGCACAGGC AAAGAACTGG TTGCCCGTAA CTTACATCAA
CTGAGTCGCC GTAAAGATAA GCCCATGATC AGCGTTAACT GCGCGGCGTT TTCAGCCTCG
CTGTTAGAGA GTGAGTTGTT TGGCCATGAG AAAGGCGCCT TTACTGGCGC GACACAGCAG
CGCAAGGGCC GCTTCGAACT CGCCCATCAA GGCACACTGT TTCTCGATGA GGTGGCCGAA
TTAAGTTTGG AGGCGCAATC TAAGTTGCTG CGAGTGATCC AAGAGCAGTC CTTCGAACGA
CTCGGCGGCA GTGAAACCAT TAAGGTCGAT ATTCGCTTAG TCGCCGCCAG TCACCATGAT
TTACTCAAGC GCGTTGAACA GGGTTTATTC AGGATGGATC TCTATTACCG CTTGAATGTC
TTCCCAATCC AAGTGCCGCC GCTGAGGGCA AGACTTGAGG ACATGCCCGA GCTTGTCAGC
CACATTTTGC ATTCCCTAAA CCGCAAACTC GGTAAGAAAC TGCGCGGCGT GAGCCAAAAA
GGTCTGCAAA AACTGATGGC CTACAGCTGG CCGGGCAATG TGCGCGAATT GCAAAATATC
CTCGAGCGGG AGGCCATTTT ATCTCAAACG GATATTTTAC AAATCCATGC TATGCCCACG
AATCACCTGC AGACTCAAAC CGCGGCCTCA CCATTACAAA CCTTGGCCGA GGCGGAAGCA
CAACACATAG AGCAAACATT AAAGCAGCTC AACTGGCGTA TTTCGGGCCC AAATGGTGCG
GCCAATGTGC TCGGCGTCCC GCCAAGTACA CTCAGATCGC GGATGAAGAA GCTCGGGATT
ACACGTCAAA CCCCTGCGGA AGAATAA
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| Protein sequence | MTSTQPAAMP LDKHFLPENQ LLLNAVGEGI YGFDLNGNAV FINPAAERMT GWKNEELLGK
NIHNCHHHSH ADGSHYPQED CPIYNTLKDG IAREITHDVF WRKDGSSFPV HYSSTPVYRD
NKLIGVVAIF RDISIQKQTE QSLRQALAQV QALSEQLASE NHYLQAELAD KTGDVDISGS
SAVIRHMIKQ LHMVANTDST VLICGENGTG KELVARNLHQ LSRRKDKPMI SVNCAAFSAS
LLESELFGHE KGAFTGATQQ RKGRFELAHQ GTLFLDEVAE LSLEAQSKLL RVIQEQSFER
LGGSETIKVD IRLVAASHHD LLKRVEQGLF RMDLYYRLNV FPIQVPPLRA RLEDMPELVS
HILHSLNRKL GKKLRGVSQK GLQKLMAYSW PGNVRELQNI LEREAILSQT DILQIHAMPT
NHLQTQTAAS PLQTLAEAEA QHIEQTLKQL NWRISGPNGA ANVLGVPPST LRSRMKKLGI
TRQTPAEE
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