Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3132 |
Symbol | |
ID | 4255107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3709714 |
End bp | 3710328 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123816 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_739173 |
Protein GI | 114048623 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0792555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTA GTACTTGGTT AGGACTATTG GCGATTTGTT GCTTGGGCGC TATGTCTCCC GGGCCGAGTT TGGCCATGGT TGTGCGTCAT ACCTTGGGCG GTGGTCGCGG CAAGGGGATC GTTTGCGCTT GGGCACACTC GATTGGTATT GGTATTTATG CGTTAGTGAC GCTACTCGGA CTAGCCGTTG TATTGAAAAA AGCGCCATTG ATTTTTAATG GGATCGCGAT TTTAGGCGCG CTCTATCTCG CCTGGATGGG GATCCAAGCA TTGCGCTCAA ACGGTGGTAT GCAGGCAAAA CTTGCGGCGG GGGAGGCGAC GGATACGCTC ACTGCGGCGC GCGATGGTAT TGCGATTTCC CTGTTCAATC CTAAGATTAT GTTGTTCTTT TTAGCGCTGT TTAGCCAGTT TGTGATGGTG GCCGATAGCT TGACGGGTCA AGCGCTTATC GTGCTAACGC CTTTGGTGGT TGATGGGCTT TGGTATACCT TGATTGCCTT ACTGTTGTCC CATTCGAGTG TATTGCCTAA GTTACGGGAA AAAGCGGGAC TTATTGATAA ACTTTCTGGT GTGGTACTGA TCCTGCTCGC GATACGGGTG GTGTACACTC TTTAA
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Protein sequence | MSFSTWLGLL AICCLGAMSP GPSLAMVVRH TLGGGRGKGI VCAWAHSIGI GIYALVTLLG LAVVLKKAPL IFNGIAILGA LYLAWMGIQA LRSNGGMQAK LAAGEATDTL TAARDGIAIS LFNPKIMLFF LALFSQFVMV ADSLTGQALI VLTPLVVDGL WYTLIALLLS HSSVLPKLRE KAGLIDKLSG VVLILLAIRV VYTL
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