Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3129 |
Symbol | |
ID | 4255104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3707501 |
End bp | 3708160 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123813 |
Product | uracil-DNA glycosylase |
Protein accession | YP_739170 |
Protein GI | 114048620 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000726683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGACTT GGCAGGCATT TATTGACCAT CAACGTTCTC AACCCTATTA CCAGCAGTTG ATAGCATTTG TGAATCAAGA GCGTGAATTG GGTAAGGTGA TCTATCCTCC TAAAGAGGAT GTGTATAACG CCTTTAAAAC AACCCCATTG GAGCAAGTGC GTGTAGTGCT TATAGGTCAA GATCCCTACC ATGGCCCCGA CCAAGCCCAC GGCCTGTGTT TCTCGGTTAA GCGAGGCATT AAACCGCCGC CATCGCTGGC CAATATGTAC AAAGAGTTAG TGAACGATAT TCCCGGTTTC CAAATCCCTA ACCATGGTGA TTTAACCCAG TGGGCGGAGC AGGGGATCTT GATGCTCAAT ACCGTGCTGA CGGTGGAGCA AGGGCAAGCC CACTCCCATG CTAATGCAGG CTGGGAAACC TTTACCACTG AGGCGTTAAA GCTGCTTAAT GCGCAGGAGC GGCCGATTAT TTTCGTACTC TGGGGCAGCC ATGCCATCAA AAAAGGGGCG GTGATTACTG CGCCGCAGCA TCACATTCTG TCGGGCCCCC ACCCGTCACC GCTGTCGGCC TATCGCGGCT TCTTCGGTTG TGGGCATTTT TCTAAAGTGA ATCAACTGCT AATGGCGCGG GGTGAGGCAC CGATCCAATG GCAGGTTTAA
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Protein sequence | MATWQAFIDH QRSQPYYQQL IAFVNQEREL GKVIYPPKED VYNAFKTTPL EQVRVVLIGQ DPYHGPDQAH GLCFSVKRGI KPPPSLANMY KELVNDIPGF QIPNHGDLTQ WAEQGILMLN TVLTVEQGQA HSHANAGWET FTTEALKLLN AQERPIIFVL WGSHAIKKGA VITAPQHHIL SGPHPSPLSA YRGFFGCGHF SKVNQLLMAR GEAPIQWQV
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