Gene Shewmr7_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3117 
SymbolapaH 
ID4257158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3697343 
End bp3698167 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content49% 
IMG OID638123801 
Productdiadenosine tetraphosphatase 
Protein accessionYP_739158 
Protein GI114048608 
COG category 
COG ID 
TIGRFAM ID[TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCATT ATTTTGTTGG TGATGTCCAA GGCTGTTTTG CCGAATTAAA ACGATTACTT 
GCTGAGGTCG ACTTTAACCC ATCCCGCGAT GAACTCTGGG CGGTGGGCGA TTTGGTCGCC
AGAGGTCCCG ATTCATTAGC CACGCTGCGC TATTTTCAAT CCCTAGGGGA TGCGGGCAAA
ACCGTCCTCG GTAATCACGA TCTGCATCTG CTCGCTCTCC ATGGCAAACT CAAGCGGGAT
AAACCCAGCG ATAACCTCGC GCCGCTGTTA AATGCGCCCG ATATTGCCAG TTTAATCGAT
TGGTTAAGGC AGCAACCCTT AATGCGGGAG TTGCCAGAGC ACAAGGTCAT CATGACCCAC
GCAGGTGTGC CGCCACAGTG GTCATTAGAC GTCTTAAGGC AAGAGTCGCA ACTTGTCAGC
CAAGCCCTCA AGCAGAGTGA TTACCTCGAG GCATTGATAA GCCAAATGTA CAGCGATACT
GCGGAGCGTT GGGATCCAAG CGCCATTGGC TTAAACCGCC TGCGCTTTTG TATCAATGCC
CTGACCCGTA TGCGTTATCT GTATGTCGAT GGTCATTTAG ATTTTGACTG TAAACAGCCA
CCCGAAGACT GTAGCAATCC ACAGCTACGC CCTTGGTTTG AATTTACCTC TGCGTTACGC
CAGAGTCACA CTTTAGTGTT TGGACATTGG GCGGCATTGA TGGGTAAAGT GAACGATCCC
AAACTAAAAG CGCTAGACAC AGGCTGTTGC TGGGGCGAAT ATCTAACCCT ATGGCATCTT
GAAAAAGACC AAAAAATTAC CCAAAAAAAG TTAAAAAAGG GTTAA
 
Protein sequence
MAHYFVGDVQ GCFAELKRLL AEVDFNPSRD ELWAVGDLVA RGPDSLATLR YFQSLGDAGK 
TVLGNHDLHL LALHGKLKRD KPSDNLAPLL NAPDIASLID WLRQQPLMRE LPEHKVIMTH
AGVPPQWSLD VLRQESQLVS QALKQSDYLE ALISQMYSDT AERWDPSAIG LNRLRFCINA
LTRMRYLYVD GHLDFDCKQP PEDCSNPQLR PWFEFTSALR QSHTLVFGHW AALMGKVNDP
KLKALDTGCC WGEYLTLWHL EKDQKITQKK LKKG