Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3072 |
Symbol | |
ID | 4255907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3648243 |
End bp | 3650816 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123753 |
Product | ATPase |
Protein accession | YP_739113 |
Protein GI | 114048563 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0239882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTCG ATCGTATGAC CAATAAATTT CAGCTTGCCA TCTCAGATGC CCAGTCGCTA GCGCTCGGGC GTGATCATCA GTTTATCGAA CCGTTACATT TGATGATGGC GCTGCTCAAC CAGGATTCTG GTTCAATCCA TCCTTTATTA ACCCAAGCTG GCATTCGGGT GAGTGCGCTG CGCTCGCTGT TGAGCCAAGA GCTTGAACGT CTACCGCAGG TCGAAGGCAC TGGCGGCGAT GTACAATTAT CCCAAGGTTT AATTCGCTTA TTAAACCTGT GCGACAAGTT GGCGCAAAAG CGCAAAGACA AATATATCTC CAGTGAGTTG TTTGTCTTAG CGGCACTCGA AGGCAGCGAT GCCTTGGCGC AATGCTTAAA GAAATCAGGC GCCACCAAAG AGCTGCTCGA GCAAACCATT GAGCAAGTGC GCGGCGGTCA GAATGTGGAT GATCCTAACG CGGAAGATCA ACGCCAAGCG CTGAAAAAGT TTACCGTCGA TCTCACTGAG CGTGCCGAGC AAGGCAAACT TGACCCTGTG ATTGGTCGTG ACGATGAAAT CCGCCGCACC ATTCAAGTGC TGCAACGCCG TAGTAAAAAC AACCCAGTGC TGATTGGTGA GCCAGGCGTG GGTAAAACCG CGATTGTTGA AGGACTCGCT CAGCGAATTG TGAACGGTGA AGTGCCTGAA GGGATTAAAA ATAAACGCGT TTTATCCTTA GACATGGGCG CACTGATTGC GGGCGCTAAA TATCGTGGTG AGTTTGAAGA GCGTTTAAAA GCCGTGCTTA ACGAGCTGGC GCAGGAAGAA GGCCAAGTGA TCCTCTTTAT CGACGAGCTG CACACTATGG TGGGCGCGGG TAAAGGCGAT GGCGCCATGG ATGCGGGCAA TATGTTAAAG CCTGCACTGG CCCGTGGCGA TCTTCACTGT GTGGGCGCGA CCACTCTCGA CGAATATCGT CAATATATTG AAAAGGATGC CGCCCTTGAG CGCCGCTTCC AAAAAGTATT AGTGGATGAG CCTAGCGTTG AAGACACCAT CGCGATTTTG CGTGGTCTCA AAGAACGCTA CGAGCTGCAT CACCATGTGG AAATTACCGA TCCGGCAATT GTGGCAGCGG CCACCATGTC GCACCGTTAT GTGTCGGATC GTAAATTGCC CGATAAAGCC ATCGACTTAA TTGACGAGGC GGCATCGAGC ATCCGTATGC AGATGGATTC TAAGCCTGAA TCTCTCGACA GATTGGAGCG CCGTGCTATT CAGTTGAAAC TGGAAGAGCA GGCATTAGCC AAAGAAAACG ATGAGGCGAG CCGCCGTCGA CTCGAACATT TGCGTGTCGA GTTACATGAA GTTGAGGCTA AGGCGTCGGA GCTTAATGAA ATCTGGCGCA CCGAAAAAGC GGCGCTTGCA GGGACTCAGC ATATTAAAGC CGACCTTGAG CAGGCGCGGA TGGATTTAGA AGTGGCGCGC CGCGCAGGCG ACTTGACCCG TATGTCCGAG CTGCAATATG GCCGTATTCC AGAGCTTGAA AAGCAACTGG ACTTAGCATC GCAAGCCGAA ATGCAGGATA TGACGCTGCT ACGCAATAAA GTCACTGACT TAGAAATTGC CGAAGTGTTA TCAAAGGCGA CGGGTATTCC GGTTTCTAAG ATGCTCGAAG GCGAGCGTGA AAAACTGTTG CAAATGGAAG TGGCACTGCA TGAGCGGGTG ATTGGCCAAA ACGAAGCCGT GGATGCGGTC GCCAATGCGA TTCGCCGTAG CCGCGCAGGG CTTGCCGATC CGAATCGTCC TATTGGTTCG TTCCTGTTCT TAGGACCAAC CGGTGTGGGT AAAACTGAGC TGTGTAAGTC GTTGGCTAAG TTTTTATTCG ATACGGAATC AGCCTTGGTG CGCATCGACA TGTCTGAATT TATGGAGAAA CACGCGGTTT CCCGTTTAGT GGGGGCGCCT CCAGGCTATG TCGGTTATGA AGAGGGCGGT TATTTAACCG AAGCGGTGCG TCGTAAGCCT TATTCGGTGA TATTGCTCGA TGAGGTGGAA AAGGCTCACC CAGACGTGTT CAATATTTTG CTGCAGGTGC TGGATGATGG CCGCTTAACC GATGGTCAAG GCCGTACCGT CGACTTTAGA AATACGGTGA TCATCATGAC CTCAAACTTA GGCTCTGACA TTATCCAAGA AGGATTCGGT CACCTAAGTT ACAGCGAAAT GAAGAGCGCG GTGATGAATG TGGTTACCCA TAGCTTTAGA CCCGAGTTTC TAAACCGGAT CGACGAGTCA GTGGTATTCC ATCCCTTGGA TGCGGAAAAT ATCAAGCATA TTGCATCTAT CCAAATTGCT TCATTGCGTA AGCGTTTGGC AGAGAAAGAC TATACGCTGG AGATCACCGA CGAGGCATTA TCGTTAATCG CCGAAATTGG TTTCGACCCA GTCTATGGCG CAAGACCGCT GAAACGTGCC TTGCAGCAAG AGATGGAAAA CCCATTAGCG CAAAAATTAC TGCGTGGCGA TTTACTGCCC GGCAAACCTA TTAAGGTCAG TTGCGCCGGT GGTGAGTTGG TATTCGAGCA ATAA
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Protein sequence | MRLDRMTNKF QLAISDAQSL ALGRDHQFIE PLHLMMALLN QDSGSIHPLL TQAGIRVSAL RSLLSQELER LPQVEGTGGD VQLSQGLIRL LNLCDKLAQK RKDKYISSEL FVLAALEGSD ALAQCLKKSG ATKELLEQTI EQVRGGQNVD DPNAEDQRQA LKKFTVDLTE RAEQGKLDPV IGRDDEIRRT IQVLQRRSKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GIKNKRVLSL DMGALIAGAK YRGEFEERLK AVLNELAQEE GQVILFIDEL HTMVGAGKGD GAMDAGNMLK PALARGDLHC VGATTLDEYR QYIEKDAALE RRFQKVLVDE PSVEDTIAIL RGLKERYELH HHVEITDPAI VAAATMSHRY VSDRKLPDKA IDLIDEAASS IRMQMDSKPE SLDRLERRAI QLKLEEQALA KENDEASRRR LEHLRVELHE VEAKASELNE IWRTEKAALA GTQHIKADLE QARMDLEVAR RAGDLTRMSE LQYGRIPELE KQLDLASQAE MQDMTLLRNK VTDLEIAEVL SKATGIPVSK MLEGEREKLL QMEVALHERV IGQNEAVDAV ANAIRRSRAG LADPNRPIGS FLFLGPTGVG KTELCKSLAK FLFDTESALV RIDMSEFMEK HAVSRLVGAP PGYVGYEEGG YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVIIMTSNL GSDIIQEGFG HLSYSEMKSA VMNVVTHSFR PEFLNRIDES VVFHPLDAEN IKHIASIQIA SLRKRLAEKD YTLEITDEAL SLIAEIGFDP VYGARPLKRA LQQEMENPLA QKLLRGDLLP GKPIKVSCAG GELVFEQ
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