Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3070 |
Symbol | |
ID | 4255905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3646688 |
End bp | 3647506 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638123751 |
Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
Protein accession | YP_739111 |
Protein GI | 114048561 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000697512 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.709756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATT CCTCGAATCA AACAGTAAAG AATAAAGGTA TCTATTTACT GCCGAATTTA TTCACCACCG CCGGCTTGTT TTCCGGTTTC TATGCTGTGA TTGCCTCTAT GAATGCTAAC TTTGAAGCGG CGGCGATTGC GATTTTTGTG GCCATGATTT GCGATGGCTT AGACGGTAGA GTGGCAAGAT TAACGAATAC GCAAAGTGAC TTTGGTGCCG AATATGACAG CATGGCGGAT ATGGTGTCTT TTGGTATGGC GCCTGCGTTA CTCGCCTACA ATTGGGCGCT TGCAGATTTA GGCAAGGTTG GTTGGCTCGC AGCATTTATC TATTGTGCGG GCGCTGCATT AAGGTTGGCA CGTTTTAATA CACAGGTCGG CGTGGCAGAT AAGCGTTATT TTCAAGGCCT AGCGAGTCCT GCGGCTGCGG CAGTAATTGC TGGTAGCATT TGGCTTGGCA ATCAGTACAA CCTCGATGGT AAGAATATCA GCTGGATTGC CGGATTGATT ACGGCCACCA CGGGATTATT AATGGTGAGT AATTTCCGCT ATCACTCTTT CAAGGAGATT GACTGGCGCG GCAAAGTGAA TTTCATCGCT ATCTTATTTG TGGTTGGTGT GTTTGTCGTT GTTTCAGTAC AACCTGCGCT AATTCTCTGT ATTGGTTTTT ATCTTTATGC AATCTCGGGT CCAGTGATCA CTATTCGCAC TGTGAGAAAA CTCAAAGTGG CACATATTGT TGGCGATGGA GAGCATGAAA AGGAACAAGA CACAGAAGAG GGCACCAAGA GTTCAAAAAA ATCTACGGAT AATCCTTAG
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Protein sequence | MQNSSNQTVK NKGIYLLPNL FTTAGLFSGF YAVIASMNAN FEAAAIAIFV AMICDGLDGR VARLTNTQSD FGAEYDSMAD MVSFGMAPAL LAYNWALADL GKVGWLAAFI YCAGAALRLA RFNTQVGVAD KRYFQGLASP AAAAVIAGSI WLGNQYNLDG KNISWIAGLI TATTGLLMVS NFRYHSFKEI DWRGKVNFIA ILFVVGVFVV VSVQPALILC IGFYLYAISG PVITIRTVRK LKVAHIVGDG EHEKEQDTEE GTKSSKKSTD NP
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