Gene Shewmr7_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3070 
Symbol 
ID4255905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3646688 
End bp3647506 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content45% 
IMG OID638123751 
ProductCDP-diacylglycerol--serine O-phosphatidyltransferase 
Protein accessionYP_739111 
Protein GI114048561 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000697512 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.709756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATT CCTCGAATCA AACAGTAAAG AATAAAGGTA TCTATTTACT GCCGAATTTA 
TTCACCACCG CCGGCTTGTT TTCCGGTTTC TATGCTGTGA TTGCCTCTAT GAATGCTAAC
TTTGAAGCGG CGGCGATTGC GATTTTTGTG GCCATGATTT GCGATGGCTT AGACGGTAGA
GTGGCAAGAT TAACGAATAC GCAAAGTGAC TTTGGTGCCG AATATGACAG CATGGCGGAT
ATGGTGTCTT TTGGTATGGC GCCTGCGTTA CTCGCCTACA ATTGGGCGCT TGCAGATTTA
GGCAAGGTTG GTTGGCTCGC AGCATTTATC TATTGTGCGG GCGCTGCATT AAGGTTGGCA
CGTTTTAATA CACAGGTCGG CGTGGCAGAT AAGCGTTATT TTCAAGGCCT AGCGAGTCCT
GCGGCTGCGG CAGTAATTGC TGGTAGCATT TGGCTTGGCA ATCAGTACAA CCTCGATGGT
AAGAATATCA GCTGGATTGC CGGATTGATT ACGGCCACCA CGGGATTATT AATGGTGAGT
AATTTCCGCT ATCACTCTTT CAAGGAGATT GACTGGCGCG GCAAAGTGAA TTTCATCGCT
ATCTTATTTG TGGTTGGTGT GTTTGTCGTT GTTTCAGTAC AACCTGCGCT AATTCTCTGT
ATTGGTTTTT ATCTTTATGC AATCTCGGGT CCAGTGATCA CTATTCGCAC TGTGAGAAAA
CTCAAAGTGG CACATATTGT TGGCGATGGA GAGCATGAAA AGGAACAAGA CACAGAAGAG
GGCACCAAGA GTTCAAAAAA ATCTACGGAT AATCCTTAG
 
Protein sequence
MQNSSNQTVK NKGIYLLPNL FTTAGLFSGF YAVIASMNAN FEAAAIAIFV AMICDGLDGR 
VARLTNTQSD FGAEYDSMAD MVSFGMAPAL LAYNWALADL GKVGWLAAFI YCAGAALRLA
RFNTQVGVAD KRYFQGLASP AAAAVIAGSI WLGNQYNLDG KNISWIAGLI TATTGLLMVS
NFRYHSFKEI DWRGKVNFIA ILFVVGVFVV VSVQPALILC IGFYLYAISG PVITIRTVRK
LKVAHIVGDG EHEKEQDTEE GTKSSKKSTD NP