Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3067 |
Symbol | |
ID | 4255902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3636926 |
End bp | 3638056 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123745 |
Product | sodium ion-translocating decarboxylase, beta subunit |
Protein accession | YP_739108 |
Protein GI | 114048558 |
COG category | [C] Energy production and conversion |
COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.738311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGTT TACTGGCTTT CTGGGCCGAA ACGGGCATAG CCCATTTTAC TGCGGGGCAA GTCTTGATGA TGGCCGTGGG CGCCTTGCTG TTATACCTTG CGATAGTGCG TGGCTTTGAG CCACTGCTAC TGTTACCCAT TGGTTTTGGT GCTGTATTGG CGAATATCCC CAATGCGGGC TTTACCGAAG AGGGAGGAAT GCTCTATTAC GCCTACCATG TTGGGATTGA AACCGGGGTG TTTCCGCTGC TGATCTTTAT GGGGGTCGGG GCACTGACAG ATTTTAGTGC GCTGATTGCC AATCCAAAGA CCTTGCTACT CGGCGCGGCG GCGCAGTTTG GGATTTTCGC GACCTTAATT GGGGCGATAG CGCTAAATCT AGTACCAGGC TTTGAATTTA CCATGCAGGA TGCCGCTGCC ATTGCCATCA TCGGTGGCGC GGATGGACCA ACGGCGATTT TCCTTGCCTC TAAGCTTGCA CCTGAGTTAC TGGGGGCGAT TGCTGTGGCG GCCTATTCCT ATATGGCGCT GGTGCCGATT ATCCAGCCGC CGATCATGCG TTTACTCACG ACCCAAGCCG AGCGTGAGAT AAAAATGGAG CAGCTACGGG AGGTGAGCAA AAAGGAAAAG ATTATTTTCC CGCTGATGGT GTTGGGCTTA ACGATTTTAT TCTTACCCGC AGCGACTCCT CTGGTTGGCA TGTTTTGCCT TGGCAACCTA ATGCGTGAGT CGGGTGTAGT AGATAGATTA TCGAAAACGG CGCAAAACGA GCTGATTAAT ATCGTCACGA TTTTCTTAGG CTTGGCCGTC GGTTCTAAAC TTTCTGCGGA TCAGTTCTTG CGCGTCGAAA CCTTAGGGAT CTTGGTTTTG GGCGCGTTAG CATTCGGCAT TGGTACCGCT GCAGGGGTGT TGATGGCAAA GCTGATGTGC AAATTAACTG GTGGTAAGGT CAATCCATTA ATTGGCGCGG CGGGCGTATC TGCTGTGCCA ATGGCGGCAA GGGTGGTGAA TAAGGTGGGA TTAGAGGCTA ATCACCATAA CTTTTTGCTG ATGCACGCCA TGGGGCCAAA CGTTGCTGGG GTATTAGGCT CTGCGGTTGC GGCGGGGATT TTACTGGCTG TGCTTGGCTA A
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Protein sequence | MDGLLAFWAE TGIAHFTAGQ VLMMAVGALL LYLAIVRGFE PLLLLPIGFG AVLANIPNAG FTEEGGMLYY AYHVGIETGV FPLLIFMGVG ALTDFSALIA NPKTLLLGAA AQFGIFATLI GAIALNLVPG FEFTMQDAAA IAIIGGADGP TAIFLASKLA PELLGAIAVA AYSYMALVPI IQPPIMRLLT TQAEREIKME QLREVSKKEK IIFPLMVLGL TILFLPAATP LVGMFCLGNL MRESGVVDRL SKTAQNELIN IVTIFLGLAV GSKLSADQFL RVETLGILVL GALAFGIGTA AGVLMAKLMC KLTGGKVNPL IGAAGVSAVP MAARVVNKVG LEANHHNFLL MHAMGPNVAG VLGSAVAAGI LLAVLG
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