Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3062 |
Symbol | |
ID | 4257312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3629759 |
End bp | 3631408 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123740 |
Product | glutamate--cysteine ligase |
Protein accession | YP_739103 |
Protein GI | 114048553 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.502221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAAGATA AGCCTCAAAA TAAAGGTCTG ACTGTTAACC TTGTCGCGAT AGCGAATCAC CAATCAGAGA AGCGCAAATT GAAGCCATTC AATGAATTAG TACAACATTT CTCGGACGCT CAAGGGCGTG CCGCACTCCT TGGCATGTTA CGTGGAATTG AGCGTGAAGC GCTGCGTATC GACGAGTCAG GCTACCTTGC GTTAGATGGT CATCCATTAG AGCTTGGCTC GGCATTAACG CATTCGCGCA TTACGACAGA TTACAGTGAA GCACTGCTTG AATTTATCAC GCCGGTAAAC AATCACGTAG GTCCCCTATT GCAAGGACTC ACCGAGACTC ATGCCTTTAG CGTGCGTCAT TTGCATGGTC AGCGCCTGTG GCCCGTGAGC ATGCCATGTT ACGTGAAGGA TGAGCAGAAT ATTCCGGTCG CCCGTTATGG CAGCTCTAAC ACGGGCAAGA TGAAAACCTT GTATCGCAAG GGCTTAACCT ACCGTTATGG CGCTCTGATG CAGATCATCT CTGGAGTGCA TTTTAACTTC TCTGTATCGC AGGAACTGTG GCAAAGCCTC TATGAGTTGA GTGACAAAAG CGTGAGCTTT GAGGATTTTA TCTCCGAATC TTACTTTGGC CTCATTCGCA ATTACCGCCG TTTAGTCTGG GTGTTACCTT ATCTGTTTGG CGCATCACCT GCGCTGTGTA GCTCGTTTAT CAAGGGGCAG AAGACCGATT TACGCTTTGA AAAATCGGGT CGCGGTACCT TGTATTTACC CTATGCGACT TCACTGCGGA TGAGCGATCT GGGTTACACC AATAAAGAGC AGGAAGATCT CAATATCAGC TATAACTCCC TGCCTGAGTA TCTGGCTGGG GTCAGAGCCG CGATTAAGAT GCCATCGGCC AACTTTGCCA ATATCGGGGT GAAGGTGGAT GGTGAATATC GCCAGCTCAA TGCCAATGTG CTGCAAATTG AAAACGAATT TTACTCGCCT ATTCGTGCTA AGCGCGTCAC GAAAAGCGGT GAGAAGCCCT CTGAAGCCCT TGCCCGTGCG GGGGTTGAAT ATATTGAGGT ACGTGCATTA GATGTAAACC CCTTCAGCCC GATTGGGATT GAAGAGAACC AAGTGCGTTT TCTCGACTTG TTCTTACTCT ATTGCTTATT AACCGAGTCG CCTAAGTCCG ATGCGGCAGA AGAAGCCCGT TTAAGTGCTA ACTTAAAATC TGTTGTGCTT GAAGGCCGTA AGCCAGGGCT CGAGTTATTA ACAGAGACAG GTACACGCTC ACTGCAAACG TGGCTTTTGG ATCTGTTTAA GCATTTGGAT TCATTGGCTA AGTTACTCGA TGGCGATAAA CAGGAGTACC AAACGGCCTT AGCCCATTGG CGTGAAGCCG TGAATGACCC ACAAAAGACC TTGTCTGGGC AAGTTATCCA GCAATTAATC ACCAAAGGCC AAGACCATGG ACAATGGGTG ATGTCACTGG CGCAGCAATA TCACCAATAT TTTATGGATT ACCCCTTATC AGCCGAGGTT GTCAGCGATT ATCAAGCCGA GGCGCAAGCA TCGCTTAATA AGCAAGCAGA CATCGAAGCG GCGCAAAGTG CGGTATCCTT TGATGATTAT CTGACGGATT ATTTCGGGAC TTCATCCTAA
|
Protein sequence | MKDKPQNKGL TVNLVAIANH QSEKRKLKPF NELVQHFSDA QGRAALLGML RGIEREALRI DESGYLALDG HPLELGSALT HSRITTDYSE ALLEFITPVN NHVGPLLQGL TETHAFSVRH LHGQRLWPVS MPCYVKDEQN IPVARYGSSN TGKMKTLYRK GLTYRYGALM QIISGVHFNF SVSQELWQSL YELSDKSVSF EDFISESYFG LIRNYRRLVW VLPYLFGASP ALCSSFIKGQ KTDLRFEKSG RGTLYLPYAT SLRMSDLGYT NKEQEDLNIS YNSLPEYLAG VRAAIKMPSA NFANIGVKVD GEYRQLNANV LQIENEFYSP IRAKRVTKSG EKPSEALARA GVEYIEVRAL DVNPFSPIGI EENQVRFLDL FLLYCLLTES PKSDAAEEAR LSANLKSVVL EGRKPGLELL TETGTRSLQT WLLDLFKHLD SLAKLLDGDK QEYQTALAHW REAVNDPQKT LSGQVIQQLI TKGQDHGQWV MSLAQQYHQY FMDYPLSAEV VSDYQAEAQA SLNKQADIEA AQSAVSFDDY LTDYFGTSS
|
| |