Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3058 |
Symbol | |
ID | 4257308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3625941 |
End bp | 3627038 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123736 |
Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
Protein accession | YP_739099 |
Protein GI | 114048549 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.556248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.515821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG CAAGTGCAAA ACCTAAGGTT TGGGTATTAG GTAATGGCCA GCTTGGCGCC ATGCTGACCC ACGCGGGCGA ACCTCTGGCG ATAGATGTTC GCGCCGTCGA TATCATGACG CCCACCGATG AAATCCTGCC GCTGGCACCT CACGATATCA TCACCGCCGA ACGCGAGCAG TGGCCTGAAT CCGCCTTAAG CTTACAACTC AGCACCCATC CGCATTTTGT TAACGGCCCA GTATTTAGCC GTTTAGCCGA CCGTTACAGC CAAAAAAGCT TACTCGATCA GATCCAAGTC CCAACTGCGC CTTGGACACT CGTCGATGAT AAGACCAACG TCGAAAACCT ATACCAAGCC TTTGGTCCTC GCGTGCTGAT GAAGCGCCGT ACGGGTGGCT ACGACGGTAA GGGCCAACAT TGGCTAAAAC AAGCCGAAGC GGGAGAGATC CCTCAAGATT GGCGTAACTT GGCCATTGCC GAGCAAGCAA TTAACTTCGA TGAAGAAGTG TCCTTAGTCG GCGTACGTAC CCGTGAAGGT CAATGCGTGT TTTATCCATT AACACTCAAC CTACACCAAG ACGGCATTTT GATGGCCTCA ATTTCGCCAC TGACTCGTCT GAATCACCTG CAAGCGCAAG CGGAAGGCAT GCTGAGCGCC ATTATGCATG AGCTGGAATA TGTCGGCGTG ATGGCGATGG AATGTTTCCG TGTTGACGAT AAGCTGCTGG TCAATGAGTT AGCGCCGCGG GTGCACAACT CTGGCCATTG GACCCAAGCG GGTACCCATA TGGATCAATT CCAACTGCAT TTAAGAGCCC TGTGCGGCAT TGCTATTCCG CAGCCACAGG TAAACTTTCA ATGCGTGATG GTCAACCTGA TTGGTATCGA TAACGATACC CGTTGGTTAA GCCTGCCTAA TGCCGAGCTT TATTGGTACA ACAAAGAAGT GCGATCTGGC CGTAAAGTCG GGCACTTAAA TCTTTCGGTA CCTAACCTTG CCGTGTTAAA AGACAGCATT GGCGCATTGC AAACTTGGAT GCCAAGCCAA TATCAAGCGC CCCTCGCGTG GATTTTAGCA GAGTTTGCTA AAGCCTAA
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Protein sequence | MTQASAKPKV WVLGNGQLGA MLTHAGEPLA IDVRAVDIMT PTDEILPLAP HDIITAEREQ WPESALSLQL STHPHFVNGP VFSRLADRYS QKSLLDQIQV PTAPWTLVDD KTNVENLYQA FGPRVLMKRR TGGYDGKGQH WLKQAEAGEI PQDWRNLAIA EQAINFDEEV SLVGVRTREG QCVFYPLTLN LHQDGILMAS ISPLTRLNHL QAQAEGMLSA IMHELEYVGV MAMECFRVDD KLLVNELAPR VHNSGHWTQA GTHMDQFQLH LRALCGIAIP QPQVNFQCVM VNLIGIDNDT RWLSLPNAEL YWYNKEVRSG RKVGHLNLSV PNLAVLKDSI GALQTWMPSQ YQAPLAWILA EFAKA
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