| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3046 |
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| Symbol | |
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| ID | 4256426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3610252 |
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| End bp | 3611718 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123724 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_739087 |
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| Protein GI | 114048537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00153895 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.316847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAAA CCATTGTAAA CTTTTTGAAC GCACTGCTCT GGGGCAAATT GCTCGTATAC
GGACTGGTGG GTGCGGGTCT TTATTTCACC TTACGACTTA TATTTATTCA AATTACGCAT
TTCAAACACT CTCTTAAAGT CATGACCATG AGCCGCCAAG GCTGTGAAAG TGGTTTGTCT
TCATTCCAAG TATTCTGTAC CAGTATGGCG GCCCGTGTTG GAGCCGGAAA CATGGCTGGT
GTTGCTGTGG CTATTGGTTC AGCTGGCCCA GGCGCCGTAT TCTGGATGTG GTTAATCGCC
ATGTTAGGTA TGGCCACGGC TATGGTGGAA TCAACGCTAG CACAGGTTTA TAAGGTACGA
GATAATAATG GCCAGTTTCG TGGTGGTCCT TCTTATTATA TGGAGAAGGG ATTGGGTCAA
AGATGGATGG GGGTGTTGTT TGCTTTCTTC CTGATTATTG CTTTTGGTTT GGTGTTTAAT
GCGGTGCAAG CAAACACCAT TACCGGTGCG ATGGAACGAG TGTTTGGCTT CAACCCGACA
TATGTAGGCA TTGGTTTAGT GTTAGCCAGT GGTTTTGTCA TTGTTGGTGG CTTACGTAAA
GTCGCGCGGG TATCTGAGTT TATTGTCCCC ATCATGGCGC TGGCTTACAT TTTGATCGCA
TTCATTATTG TGCTGTTCAA TTTAGAGCAA TTACCCGCCG TGATCAGCCT GATTGTGAAG
AGTGCTTTTG GTTGGCAAGA AGCCGCAGCG GGTGGTGTTG CTTACACTGT TGCTCAGGCT
ATGCAAGCGG GGATTGCTCG AGGTCTGTTC TCAAACGAGG CGGGGATGGG GAGCGCAGCA
AACGTCGCGG CCAGTGCGTC ACCGAATCCT AACCATCCAG CATCCCAAGG TTTTGTGCAG
ATGATGGGAG TATTTGTCGA TACCATAGTT ATCTGCACCG CAACCGCGGC CATTATTTTG
CTCTCAGGCG ATATTGGTTC TAGTGAAGAT GGTATTCGTC TCACCATCAA TGCAATGTCA
AACCACGTCG GTGATTGGGG CGGCGCCTTT ATCGCGATAG CCATTTTCCT ATTCTGCTTC
ACCTCTATCA TTGCTAACTA TTCCTACGCG GAAACCAATG TGATGTTCTT AACGGGTAAC
AGTACTAAAG CGTTGCCGTT ATTCCGCCTC TGTGTATTAG GCATGGTGAT GTTTGGTGCC
GTGGCCAAAA TCAGCTTAGT GTGGAATTTA GCGGATGTGT CTATGGGGCT AATGGCTACG
GTCAATATCA TTGCCTTGTT GCTGTTGTCG GGTTTGGCGA TCCGTGTCAT CAACGATTAC
AGTGAGCAGC TTAAGAGCGG CAAAATGCCT GAGTTCGACC GCAGTAAGTT CCCAGAGTTA
ATGGAGCAAC TCGATGATGG TATTTGGCAG GATACTAGCG CAAATGAGTT GGTAAAGACC
CGTGCTGAAT CTGTTGTCAG TCGATAA
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| Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT LRLIFIQITH FKHSLKVMTM SRQGCESGLS
SFQVFCTSMA ARVGAGNMAG VAVAIGSAGP GAVFWMWLIA MLGMATAMVE STLAQVYKVR
DNNGQFRGGP SYYMEKGLGQ RWMGVLFAFF LIIAFGLVFN AVQANTITGA MERVFGFNPT
YVGIGLVLAS GFVIVGGLRK VARVSEFIVP IMALAYILIA FIIVLFNLEQ LPAVISLIVK
SAFGWQEAAA GGVAYTVAQA MQAGIARGLF SNEAGMGSAA NVAASASPNP NHPASQGFVQ
MMGVFVDTIV ICTATAAIIL LSGDIGSSED GIRLTINAMS NHVGDWGGAF IAIAIFLFCF
TSIIANYSYA ETNVMFLTGN STKALPLFRL CVLGMVMFGA VAKISLVWNL ADVSMGLMAT
VNIIALLLLS GLAIRVINDY SEQLKSGKMP EFDRSKFPEL MEQLDDGIWQ DTSANELVKT
RAESVVSR
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