| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3034 |
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| Symbol | |
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| ID | 4256414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3597785 |
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| End bp | 3598786 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638123712 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_739075 |
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| Protein GI | 114048525 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0770225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGTT CAGTAACGTT AGCCACTACT CATTCAGCTA GAACCAACCA ACGAGGTTTA
TCACTCGTCG AGTTAATGGT TGCTATGGTT ATTGGTCTGT TTTTAACTGC TGGCGTTTTT
ACGATGTTCA GTATGTCTTC TTCTAATGTC ACCACCACTA GTCAGTTTAA TCAATTGCAG
GAAAATGGCC GTATTGCTTT AGCTATATTA GAACGTGATC TTACTCAGTT AGCCTTTATG
GGGGATATGA CGGGTACAGA TTTTATTCTC GGTATTAATA CAACATTAGA GGCTGCGGTT
GCTAAGGATT GCATTGGTGC AGGATTAAAT AATGAGACGT TGCCAAATAA TCAACCTGCA
CATTTTAGAC GCCTTTGGGG ATATGAAAAT AAAAGTAACT CAGCCACATT AAGCTGTTTA
CCTTATGATG AAGTGAACCC AAATACGGAT GTTATTCAAT TAAAAAGATT TATCGGCCCC
AGTTTGTTAG CAGGCTTGAC TAGTGGTTTT AATGTAGCAA CGAATACCTC TCAAGCAGTA
TTTTTTAAAG GTGCAGCTCC AACCACAGTT ACGTTAGAAA ATGCTAGAAC ATGGGAGTTT
CAACATCATG TTTATTTTAT TGCAGATGAT GCGGGTGGGA TACCAGTTCT AAGGCGTAAA
ACTCTCACTG ATACGGGAAT GAGTGGCGAG GAGCAGCTCG TTGAAGGTAT TGAGAATATT
CGGTTTCTTT ATGGTTTTGA TAATGATGGG GATAGTACAC CTGACAGTTT TATGCCTGCT
GAAAAAGTTT CGTCTTTAAT GTGGGACAAC GAGGGATTCC AGCGTCTAGT GGCTATCAAA
GTGTATTTAA TGGTTCGTTC AATAAATGAA GATCGTAGTT ATACCAATGA AACGATTTAT
CAGCTTGGTG ATAAGCAAAT TAAAGGATTG AACGATCATT ATCGTCGTAA AATTTTGTCG
ACGACAGTCG TATTAGAAAA CCCTGTGTTG ATTCGAAGTT AA
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| Protein sequence | MKCSVTLATT HSARTNQRGL SLVELMVAMV IGLFLTAGVF TMFSMSSSNV TTTSQFNQLQ
ENGRIALAIL ERDLTQLAFM GDMTGTDFIL GINTTLEAAV AKDCIGAGLN NETLPNNQPA
HFRRLWGYEN KSNSATLSCL PYDEVNPNTD VIQLKRFIGP SLLAGLTSGF NVATNTSQAV
FFKGAAPTTV TLENARTWEF QHHVYFIADD AGGIPVLRRK TLTDTGMSGE EQLVEGIENI
RFLYGFDNDG DSTPDSFMPA EKVSSLMWDN EGFQRLVAIK VYLMVRSINE DRSYTNETIY
QLGDKQIKGL NDHYRRKILS TTVVLENPVL IRS
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