Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3019 |
Symbol | |
ID | 4257569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3579363 |
End bp | 3580850 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123697 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_739060 |
Protein GI | 114048510 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00108184 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TAGCCTTAAA AGTACAAATT GGGTTAGCAG CTGCGATATT TATGATAGTC AGCGTGCTGT TTGGGGTGTC CTATTGGTTG GCGAGCGATA GCTTGACCAG CAACGAAATG GCCTTTGAAG ACAATACCGT TGCTAATCTT CAGGTCACCA TGGCGCAGCC GATTTTTACC TACGACTACG AGCAGATCCG TGCGGTGTTG TCTGTCATGT TAAAGTCTGA GCAAATCTAT CAAATCACCG TTGTGGATCA TCGGGGTAAA TTGCTCGCCG AAGACAAACA AACCGAGGCC GTTGCCGCAA GCGACCTACA AACAAGAGAG TTACAGTTCA GCGACCAAGG TAATCCGACC GGGCGTTTAA CCATTGCCTT CTCGACTTTG CCGGTTAAGG CGCAATTATC CGACTTACTG CTGGGGTACT TTTTACAGGC GCTGCTGATT TTAGCGGGTA GTCTGTTAGT GATTTTCATC ATTCTCAAAC GCTTAGTGAT TAGTCCTTTG GATAAGGTTG TCGCCGCGTT AGAAGAAATC GCCAATGGTG ATGGCGATTT AAGCCACAGA TTACCCGTGG AGAGCGAAGA TGAAATCGGC AAACTTGCCA ATGCTTTCAA CGGTTTCGTC GAGCAAATTC ATGGCACTAT TACCAGAGTG CATGAAACCT CGGGCCTGCT ATTGGGCGAT GCTAAGGCGC TGGGTACGCT GTCGCAAAGC AACAATCAAA GGGTGCAAGC TCAGCTTAAA GAAACCGAAG CCGCGGTCAC GGCCGTGACT CAATTGAGCG CCAGTGCCAA CGAAGTGGCC ATTAATGCAA AACGTACTGC TGATGCGGCA ACCCAAGCCG ATAGAGCGGT CGACGACGGG CAGCGTCAGT TTGACTCGGG CTTAGCCATT ACCCGTCAAT TAGCGGGGGA ATTAGCGCGT TCTGCCCAAT CGGTATCGCA GCTACAACAG GAAACTCAAC GCATCGATGA AGTCGTGGTG GTGATCAACA GCATTGCCGA ACAGACTAAT CTACTCGCCC TAAATGCCGC CATTGAAGCC GCCAGAGCGG GTGAGCAGGG GCGTGGTTTT GCCGTTGTTG CCGATGAAGT GCGCTCATTA GCGAGCCGCA CCCAACAGGC GACGGGAGAA ATCCAAAAAA TGATCCAACA GGTGCAGAGC CGAGTTGCAG AAACCGTGAA TGTGATGCAA TCGAGCCAGA CTCTCTCCAA TCAAGGGGTC AACCGTTCGG AAGAAATTAA GCTAGTGCTG TCTAAAGTGA CTGATTTAGT TTCCAATATC AGTAATATGA ATATCGAAGT TTTCCATGCG GCGCAGGAGC AGACCTGCGT CACCGAAGCG ATTTCTCGTA CATTAAATGA TCTTGCCAAT GTCTCAGGTT CAGCCTCCCT CGATAGTGAG CACTTAGCAC AATCGAGTGA GCGACTGTTT CACCAAGGGG AAAGACTGCG GACGTTAGTA ACTTCCTTCA GATTGTAG
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Protein sequence | MKKLALKVQI GLAAAIFMIV SVLFGVSYWL ASDSLTSNEM AFEDNTVANL QVTMAQPIFT YDYEQIRAVL SVMLKSEQIY QITVVDHRGK LLAEDKQTEA VAASDLQTRE LQFSDQGNPT GRLTIAFSTL PVKAQLSDLL LGYFLQALLI LAGSLLVIFI ILKRLVISPL DKVVAALEEI ANGDGDLSHR LPVESEDEIG KLANAFNGFV EQIHGTITRV HETSGLLLGD AKALGTLSQS NNQRVQAQLK ETEAAVTAVT QLSASANEVA INAKRTADAA TQADRAVDDG QRQFDSGLAI TRQLAGELAR SAQSVSQLQQ ETQRIDEVVV VINSIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRSL ASRTQQATGE IQKMIQQVQS RVAETVNVMQ SSQTLSNQGV NRSEEIKLVL SKVTDLVSNI SNMNIEVFHA AQEQTCVTEA ISRTLNDLAN VSGSASLDSE HLAQSSERLF HQGERLRTLV TSFRL
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