Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3018 |
Symbol | |
ID | 4257568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3576644 |
End bp | 3579334 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123696 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_739059 |
Protein GI | 114048509 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00614959 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA CGATTGCCGC CACCGCGATT TTATTGGCTC TGGGCTTAAC GGCCTGTAGC GATGCGCCTA AAACCAATGC TGTGCCTAGC TCAAGTACTG CCGAGCAAGC TAAGCCCAAC CAATTAACCC AAGCGCAATT GCAGCAGTTT GGGGATACCT TGGGCGTGAG TTATCGCGTG CTGACTAACA GGTCTGACGA TAGCTGTGAC AAAGCCGCCG CCGAAGGACG TTGTTTTGTT GCTGAAATCG ATCTTGTCCC AGAGGTTGAG CTTAAGAGCC GTGATTGGGC GATTTATTTT AGCCAAATGC GCCCAGTTCA AGCCGTTGAA AGTAAAGAGT TTAGTGTTAC GCATATCAAG GGCGATCTGT ATCGTATCGC ACCCACAGAG GCATTTAGCG GTTTTAGCAA GAGCGAGAAA AAGACCCTAA GGTTCCGCGG TGAGTTGTGG CAGCTCTCAG AAACCGATGC CATGCCCAAC TATTACATAG TTGCAGGCGA TTTATCGCCA GTGGTGATCG CCAGCACGCA AGTGCAGCAA GATCCTGAGA CTCTGATGGA GGTGCGCCCC TATGTTGAGG CGTACACCGA TATGGTGAAG CAGTATCGCC GTACCGATGC GGATAAATTA GCGCCTGCGA CGCCAACGCA GTTGTTTAGC AATAATCAAC AGGTCAGTGA AGATGCCAGC TTAGCGGTCA ATACCATTAT TCCGACGCCA CAAAAAGTCG CTATCCACAG CCAAGATAAA GCCGTGTCAC TGAACTCTGG TATTAAACTG GATTTCGGCT CTGTCACTAA CGCATCTGCC GCGCAACAAC CTTTGGATCC TAAACACTTG GCGGCGGCAC TTTCCCGTTT AGCGCGCTTA GGCGTTAACG AGTCAGAACA TGGTGTAGCG GTAAAGCTGA ACTGGCGTCA AGGCGCTGAG GGCAGCTATC TGCTGGATAT CAAAGCGGAT GCGATTGAGA TTGCCGCTGC CGATGCTGCC GGGTTTTCCT ATGCGTTATC GTCACTTGCC AGTCTGATTG ATGTGCAGGA TCTGCGCGTA AATACCATGA CGATTGAGGA TAGCCCAAGG TACTCGTTCC GTGGCATGCA TATCGACGTG GCCCGTAACT TCCATAGCAA GGCGTTGATC TTTGACCTGC TGGATCAAAT GGCGGCGTAC AAGCTCAACA AATTGCATTT ACATATGGCA GACGATGAAG GTTGGCGCCT AGAGATCGAT GGCCTGCATG AACTGACCGA CATCGGCAGT AAGCGTTGCC ACGACCTTGA GGAAAATACC TGTCTGTTAC CGCAGCTTGG CAGCGGGCCT TTTGCGGATG TGCCCGTCAA CGGTTTCTAT AGCAAACAAG ACTATATCGA CATCGTTAAA TATGCTGATG CGCGCCAAAT TCAGGTGATC CCTTCGATGG ACATGCCAGG CCATAGCCGC GCGGCGATAA AATCGATGGA GGCGCGTTAC CGTAAGCTAG TGGCCGAAGG TAAAGCTGAG GAAGCGAAAA CCTATCTGTT GTCGGATGCG GCGGACACCA CTGTGTATTC TTCGGTGCAG TATTACAACG ATAACACGCT CAACGTTTGT ATGGAGTCGA CCTATCTGTT TGTCGATAAA GTCATTGATG AAATTGCAAA ATTACACCAA GCAGCGGGCC AGCCATTAAC TCGATACCAT ATCGGTGCCG ACGAAACGGC AGGGGCGTGG AAGCAATCGC CAGCCTGTTT GGACTTTGTG GCCAATAACG ATAAAGGCGT GAAATCCATC GACGATTTAG GGGCGTACTT TATCGAGCGC ATTTCGAATC AACTCGCGAG TAAAGGCATC GAAGCGGCTG GTTGGAGCGA TGGTATGAGT CATGTTCGCC CAAGCAACAT GCCTGCGAAA GTCCAATCCA ACATTTGGGA TGTGATTGCC TATAAGGGCT ATGAGCATGC CAATCAACAA GTCAACAACG GCTGGGATGT GGTGCTCTCA AACCCCGAGG TGCTGTATTT TGATTTCCCC TATGAAGCCG ATCCTAAGGA GCATGGCTAC TACTGGGCAA GCCGCGCAAT CAACGCACAC AAAGTGTTTA GCTTTATGCC GGACAACTTA GTGGCAAACG CGGAGCAGTG GACCGATATT CAAAATCTGC CTTTTGAGGC CGACGATAGG GCCAGAACCG ATGAGAAGGG CAAACAATCC GGCCCAAGGG AACAAGGTAA AGCCTTTGCC GGATTACAAG GCCAGCTCTG GAGTGAAACC ATCCGTAGCG ATAACACTGT GGAATATATG ATTTTCCCAC GTTTACTGAT GCTGGCGGAG CGTGCTTGGC ATCAAGCCGC GTGGGAAGTG CCATATCAAT ATCAAGGCGC TTTGTATAAT CAAACTACGG GACATTTCAC CGCTGCGATG CGTGAGGCTC AGGCGCAATC TTGGCAGCAA ATGGCTAACA CCTTAGGGCA TAAGGAGTTT ATCAAACTCG ATAAGGCGGG TATCGATTAC CGAGTGCCGA CTGTCGGTGC CGAGATCCGT GACGGTAAAC TGTTTGCCAA TGTCGCTTAT CCAGGACTCA AGATTGAATG GCGACAAGCG AGTGGGCAAT GGCAATCCTA TCAAGCAGGG CAGGCGGTAA CGGGTCCCGT TGAGATCCGC GCCATCGCGG CCGATGGGAA ACGTAAAGGC CGCAGCTTAG TCGTTAATTA A
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Protein sequence | MNKTIAATAI LLALGLTACS DAPKTNAVPS SSTAEQAKPN QLTQAQLQQF GDTLGVSYRV LTNRSDDSCD KAAAEGRCFV AEIDLVPEVE LKSRDWAIYF SQMRPVQAVE SKEFSVTHIK GDLYRIAPTE AFSGFSKSEK KTLRFRGELW QLSETDAMPN YYIVAGDLSP VVIASTQVQQ DPETLMEVRP YVEAYTDMVK QYRRTDADKL APATPTQLFS NNQQVSEDAS LAVNTIIPTP QKVAIHSQDK AVSLNSGIKL DFGSVTNASA AQQPLDPKHL AAALSRLARL GVNESEHGVA VKLNWRQGAE GSYLLDIKAD AIEIAAADAA GFSYALSSLA SLIDVQDLRV NTMTIEDSPR YSFRGMHIDV ARNFHSKALI FDLLDQMAAY KLNKLHLHMA DDEGWRLEID GLHELTDIGS KRCHDLEENT CLLPQLGSGP FADVPVNGFY SKQDYIDIVK YADARQIQVI PSMDMPGHSR AAIKSMEARY RKLVAEGKAE EAKTYLLSDA ADTTVYSSVQ YYNDNTLNVC MESTYLFVDK VIDEIAKLHQ AAGQPLTRYH IGADETAGAW KQSPACLDFV ANNDKGVKSI DDLGAYFIER ISNQLASKGI EAAGWSDGMS HVRPSNMPAK VQSNIWDVIA YKGYEHANQQ VNNGWDVVLS NPEVLYFDFP YEADPKEHGY YWASRAINAH KVFSFMPDNL VANAEQWTDI QNLPFEADDR ARTDEKGKQS GPREQGKAFA GLQGQLWSET IRSDNTVEYM IFPRLLMLAE RAWHQAAWEV PYQYQGALYN QTTGHFTAAM REAQAQSWQQ MANTLGHKEF IKLDKAGIDY RVPTVGAEIR DGKLFANVAY PGLKIEWRQA SGQWQSYQAG QAVTGPVEIR AIAADGKRKG RSLVVN
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