| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2989 |
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| Symbol | |
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| ID | 4256300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3538460 |
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| End bp | 3540184 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638123666 |
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| Product | DNA primase |
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| Protein accession | YP_739030 |
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| Protein GI | 114048480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00884135 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATAC CTCGTGATTT TATCAATGAG CTAATCGCTC GCACCGACAT TGTCGAACTT
ATCGACCGCA AGGTGCCCTT GAAAAAGGCG GGTAAAAACT ACTCGGCCTG TTGTCCTTTT
CATAGCGAAA AATCACCTTC GTTTACCGTT AGCCGCGATA AACAGTTTTA TCATTGTTTT
GGCTGCGGTG CCCACGGCAA CGCCATCGAT TTTGTGATGG AGTACGACAG ACTCGATTTT
GTCGATGCCA TAGAAGATCT TGCCGGACAA CTGGGCTTAG AAGTCCCAAG GGAACAAGGC
ACGGGTAAAC GCCAAGACGA TGGCCTAAGC CGTGATCTAT ACCAATTAAT GGAAGAAGCG
AGTCGCTTTT TTCAAACTCA GTTAAGACAA CACCAAGATA AACAAAAAGT CATCGACTAC
CTCGCCTATC GCGGATTATC CGATGATATT GTTGAGCATT TTGGGATTGG TTTTGCACCC
GACGGTTGGG ATGGCTTATT AAGCCGCTAC CGACACAGTC AAGATGCACA GGATAAACTC
CTGACCGCAG GCATGCTGAT CAGCAATGAC AGCGGTAAAA GATACGACAG ATTCCGTGAC
CGCCTTATGT TTCCTATTCG CGACCGCCGT GGTCGTGTGA TTGGATTTGG TGGCAGAGTA
TTGGGAGATG GCACCCCCAA GTACTTGAAT TCGCCAGAAA CGCCCATATT TCATAAGGGC
AATGAACTCT ACGGCCTATA CGAGCTAAAA CAACGTCATC GCGATCCCGA TAAGGTACTG
ATTGTCGAAG GCTATATGGA CGTGGTCGCC CTCGCCCAAT ATGGCGTGGA TTACGCGGTT
GCCTCACTAG GCACCTCGAC GACGGCCGAA CAATTCCAGT TGTTACTACG TAGTGCCAAG
GAAGTGATTT GTTGTTATGA CGGCGATAGA GCCGGTAATG AGGCCGCCTG GCGCGCCTTA
GAAACCGCTT TACCCCTACT CAAACCTGGG GACAAAGTGC GTTTTATGTT TTTACCTCAA
TCTGAAGATC CGGATTCAAT GGTTCGTAAG ATTGGTAAAG ACGCCTTCGA GCAAATGATG
GAAAGTGCCA TCACGCTGCC CGAATTTTTG TTTGATACAT TAGCGACGAA ATTTGGTACC
GATAAAGGTA ACTTAGCCAA ACAAGCCTTT GGCCTAATTG AAAAAATTCA AGATACTGTG
CTGCAAAACC TGCTACTTGA GAACTTAGCT CACAAGTTAG GCATGAACAG CTCAGACGAT
ATGAAGAAAA AACTGGGTTT TAGTGTCAAA CAAACTAAGC CCACAGCATC AACAGGACTC
AAAGGACGCG GTACACCATT GCGACTTGCC ATCGCCTTGT TAGTGCAGCA TCCCGAGCTG
GGAGTGGGAT TATCCCCACA ACCGGCATTA AACCATCTGC AAATGCCAGG CATCGACTTG
CTGCCATTGC TGTTGGAATT AACACGAGAG CATAGGTTAA ACAGCGCACA ACTACTTGAG
CAATTCAGAG ACAGCCCCCA CAGCGGGACG CTGCATAAAT TAGCCCAATG GGACCATCAA
GTGGCGGATG AAAACCTGCT CGAAAAGTTT AAACAGACCC TGGTTTGGTT GAACAATCAA
TATATTGAAC AACGATATCA GGAATTGAGT CTAAAACAGA CCCATACTAA GGAAGAGAAG
ATCCAGCTGC AGAAGCTGAT CTCAGTCATG AAAGGACTAA ACTGA
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| Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF
GCGAHGNAID FVMEYDRLDF VDAIEDLAGQ LGLEVPREQG TGKRQDDGLS RDLYQLMEEA
SRFFQTQLRQ HQDKQKVIDY LAYRGLSDDI VEHFGIGFAP DGWDGLLSRY RHSQDAQDKL
LTAGMLISND SGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG
NELYGLYELK QRHRDPDKVL IVEGYMDVVA LAQYGVDYAV ASLGTSTTAE QFQLLLRSAK
EVICCYDGDR AGNEAAWRAL ETALPLLKPG DKVRFMFLPQ SEDPDSMVRK IGKDAFEQMM
ESAITLPEFL FDTLATKFGT DKGNLAKQAF GLIEKIQDTV LQNLLLENLA HKLGMNSSDD
MKKKLGFSVK QTKPTASTGL KGRGTPLRLA IALLVQHPEL GVGLSPQPAL NHLQMPGIDL
LPLLLELTRE HRLNSAQLLE QFRDSPHSGT LHKLAQWDHQ VADENLLEKF KQTLVWLNNQ
YIEQRYQELS LKQTHTKEEK IQLQKLISVM KGLN
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