| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2955 |
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| Symbol | gltD |
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| ID | 4257397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3499438 |
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| End bp | 3500844 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638123632 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_738996 |
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| Protein GI | 114048446 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0982485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCAACTAA ACACCCTGCA
GCAAAGCGTT CGACTCAGTT TATTGAGATT TATCAGCCCT TTGCACAAGC TCAGGTGACT
GAACAGGCGG ACCGTTGTCT CGATTGCGGC AACCCTTATT GTGAGTGGAA ATGCCCGCTG
CACAACTATA TTCCCAACTG GCTAAAGCTG GCGCAACAGG GCCGGATCAT GGAGGCGGCA
GACTTAGTCC ATGAGACCAA TACCCTGCCC GAGATCTGTG GCCGCGTCTG TCCACAGGAC
AGACTATGTG AAGGGGCTTG TACCCTAAAC GCCGACTTTG GCGCCGTGAC TATCGGTAAT
GTGGAGAAAT ACATTACCGA TACCGCCATC GCCCAAGGCT GGCGTCCGGA TATGAGTAAG
GTCACGCCAC GCAAGGAAAA GGTCGCGATT GTGGGCGCAG GCCCTGCTGG TTTAGGCTGC
GCCGATATTC TTGCCCGTAA TGGGGTTAAG GCTGTGGTGT TTGATAAATA TCCCCAGATT
GGTGGCCTGC TGACCTACGG CATTCCCGCC TTTAAACTGG ATAAAGCCGT GATGGCGACT
CGCCGCACTG TGTTAGAAGG CATGGGCATC GAGTTCAAAC TGGGCGTAAC TGTGGGTAAG
GATGTTGCCT TTAACCAACT GCTTGAGGAA TACGATGCCG TCTTCCTCGG CATGGGAACC
TACACCGCCA TGAAAGCGGG CCTTGAGGGC GAAGATGCCC AAGGCGTGTA CCAAGCTCTG
CCCTACTTGA TTGGTAATAC CCACCACCTG ATGGGCAGCA GTAATCCAGA CACCCCTTAC
CTCAACCTTG CCGGTAAGCG CGTCGTGGTA TTAGGTGGTG GTGATACGGC TATGGACTGT
GTTCGCACCG CCGTGCGCCA AGGTGCCAGC AGTGTGATTT GTGCCTATCG CCGTGATGAA
GCCAACATAC CGGGTTCACG CCGCGAAGTG CAAAACGCCC GTGAAGAGGG AGTGAACTTC
CTGTTTAACC GTCAACCCGT GGCGATTAAA ACCCAGGACG GTAAAGTGGT GGGTGTGGAA
TGCGTTGAAA CCCAAATGGG TAAAGCCGAT GCGAGTGGCC GTCAACGTGC CGAAGCAATT
GAAGGCAGCG AGCAGTTACT CGACGCCGAT GCGGTGATTA TCGCTTTCGG TTTCCAACCT
AGCCCTGCGC CTTGGTTTGC CGATTATGGC ATTGAACTCG ACCAATGGGG CCGAGTAAAA
GCCAGTAAAC AGGCCGATAA CCCATTCCAA ACCACCAATC CAAAGGTATT TGCTGGCGGC
GATATGGTCC GTGGCTCGGA TCTGGTTGTG ACCGCAATTG CCGAAGGACG TGATGCCGCG
CAAGGCATTC TTAACTACTT AGATTAA
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| Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRSTQFIEI YQPFAQAQVT EQADRCLDCG NPYCEWKCPL
HNYIPNWLKL AQQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN ADFGAVTIGN
VEKYITDTAI AQGWRPDMSK VTPRKEKVAI VGAGPAGLGC ADILARNGVK AVVFDKYPQI
GGLLTYGIPA FKLDKAVMAT RRTVLEGMGI EFKLGVTVGK DVAFNQLLEE YDAVFLGMGT
YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGSSNPDTPY LNLAGKRVVV LGGGDTAMDC
VRTAVRQGAS SVICAYRRDE ANIPGSRREV QNAREEGVNF LFNRQPVAIK TQDGKVVGVE
CVETQMGKAD ASGRQRAEAI EGSEQLLDAD AVIIAFGFQP SPAPWFADYG IELDQWGRVK
ASKQADNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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