| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2934 |
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| Symbol | |
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| ID | 4257709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3476378 |
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| End bp | 3477310 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638123611 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_738975 |
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| Protein GI | 114048425 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0210379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGTCTAA TCCTGTTGGC TTTAGTAGCC TTGGTATTCC CTGCAGTGGC GCAGGAAGAT
ATGCCTGCTA AAGTCTGGCT TGAAAAAATG AGCCAGGCTT TACAAGAGAA AGAATTTAAA
GCATCGATTA TACAACTTCA GGCCGACCAT ATTCGGCCTT TGGTTTATCT TCACGGTAAG
GTGAATAATC AGGAAGTTGC GTTTCTTGAG TACCTCAATG GCCCGCCAAA AAATGCGGTC
AGAGTGGGCA ATCGAGTCAC CTTTATCGAA CACGATCAAC CCGCCTATAG CATCCTTTCT
AATCATATTC AGGGCGTATG GCCTGCGGCT TTCTCGTCAA AGATGAGTGA TTTAGAAGTG
GGTTATCAGT TTGTACTCGG TGGTCGTACG CGTATTGCGG GACGTCCCGG TCAAATGATC
CGTTTATTGC CAAATGATGA GTACCGTTAC GGTTTCCAAA TTTGGCTGGA TATGGACACC
TACCTGCCCC TCAGATACGA CATGCTGACT CAAGATAAAC AATTACTTGA ACAGTTGATG
GTGATTGAGC TTATTGAGTT AAATGAGCCG CCATCGATTC TGCAGGAAGC CTATAAGCAA
GAATGGCCAG CGGTTATCGA CCAGGCTGAA CGCCAAGATG GACAAAATTG GCAGTTTTCT
TGGTTGCCAG CAGGATTTAG CGTTGTGGTG CGTGATCATC ACCGTTTGAT TGGCAGTCAC
GAGGCGGTTG AATATATTGC GTTAACCGAT GGCTTAGCCA GTATTTCTGT CTATGTCGCG
CGTGCTGGCT CGACGCCATT ACCCGAAGAG TTAATCACTC GTAATGGTTT GTCTTTGGTA
TCTGAAAAAG TGGGTAATGC CGAAGTAGTT GCCGTAGGTA AAGTACCGAC CGAAACCCTA
GCCCGTATCG CGAAAAGTCT GATGTTAGAA TAA
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| Protein sequence | MRLILLALVA LVFPAVAQED MPAKVWLEKM SQALQEKEFK ASIIQLQADH IRPLVYLHGK
VNNQEVAFLE YLNGPPKNAV RVGNRVTFIE HDQPAYSILS NHIQGVWPAA FSSKMSDLEV
GYQFVLGGRT RIAGRPGQMI RLLPNDEYRY GFQIWLDMDT YLPLRYDMLT QDKQLLEQLM
VIELIELNEP PSILQEAYKQ EWPAVIDQAE RQDGQNWQFS WLPAGFSVVV RDHHRLIGSH
EAVEYIALTD GLASISVYVA RAGSTPLPEE LITRNGLSLV SEKVGNAEVV AVGKVPTETL
ARIAKSLMLE
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