Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2931 |
Symbol | |
ID | 4257706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3472838 |
End bp | 3473755 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123608 |
Product | signal peptidase I |
Protein accession | YP_738972 |
Protein GI | 114048422 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0311128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCT ATTTTTCCAT TATTTTAGTG CTAGTCACCC TGATTTCAGG GCTGATCTGG TTAATCGATG TGCTGGTATT TGCGCCTAAA CGCCGCGAAA GCTTAGCCTT AGCCAAGGCT TCGCAGGCTA ATTTAACCGA GGAAGCCGAA TATAACATCA TCCGCGAACC CACAGTGGTT GAAACCGCGC ATTCCATCTT CCCTGTGATT GCCTTCGTGT TGATCCTGCG CTCGTTTATT TATGAACCAT TCCAAATCCC CTCTGGCTCT ATGATGCCAA CCCTGTTAGT GGGTGACTTT ATTCTGGTGG AAAAGTTTAG CTATGGCCTA AAAGATCCCG TATGGCGCAC TAAACTGATT GAAACGGGCG AGCCGAAACG TGGCGATGTG ATTGTGTTTA AATATCCTGA GAATCCTCAG ATTGACTACA TCAAGCGCGT GGTGGGTTTA CCGGGGGATC GGATTATTTA CCGCAACAAG CAGTTGATGA TCCAAAAAGC CTGCGGCGCA GAGCAAACCC ATTGTCCAGA GCCAGAACTG GTGGCGCGTA CCGAAATCAG CCGTGGTGAT TTCAGCCAAG ATGGTGTGCC ATTAATTCGT TTTAAAGAGC AACTCGGTGA AGTGGCACAC GATATTTTAA TCAATCCAAG CCGCCCCGAT ATGCTGGGAT ACTTCAAGCG TGAAGCTAAC TTACCCGCAG GTGAGTTCCT TGTACCCGAA GGACATTATT TTGCGATGGG TGACAACCGC GATAACAGTA CCGACAGCCG TTTCTGGGGC TTTGTCCCTG AAGAAAATCT TGTCGGCAAA GCGGTCGCTA TCTGGATTAG TTTTGAGTTT GACCGTTCTA AAGCCGACTT CCTGCCAACT TGGGTGCCAA GTGGAGTACG TTTTGAACGA GTAGGTGGAA TTCACTAG
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Protein sequence | MAAYFSIILV LVTLISGLIW LIDVLVFAPK RRESLALAKA SQANLTEEAE YNIIREPTVV ETAHSIFPVI AFVLILRSFI YEPFQIPSGS MMPTLLVGDF ILVEKFSYGL KDPVWRTKLI ETGEPKRGDV IVFKYPENPQ IDYIKRVVGL PGDRIIYRNK QLMIQKACGA EQTHCPEPEL VARTEISRGD FSQDGVPLIR FKEQLGEVAH DILINPSRPD MLGYFKREAN LPAGEFLVPE GHYFAMGDNR DNSTDSRFWG FVPEENLVGK AVAIWISFEF DRSKADFLPT WVPSGVRFER VGGIH
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