Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2886 |
Symbol | |
ID | 4255720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3422854 |
End bp | 3424182 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123563 |
Product | short chain fatty acid transporter |
Protein accession | YP_738927 |
Protein GI | 114048377 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2031] Short chain fatty acids transporter |
TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACCA AAGCGGCAAA ACCTCTGGTC AAGCTCGTCG ACCGTTATTT ACCCGACCCT TATATCTTTG TCTTGCTCTT AACCTTAGTG GTACTGATCT CGGCGGTGGT GGCCGAGCAG AAAACCCCAC TCGAAGTCAT CAATTATTGG GGCGATGGCT TTTGGGCGCT ACTGAGTTTT TCGATGCAGA TGCTATTAGT GCTGGTGGCG GGATTTATGC TCGCCAGCTC GCCACCGATT AAGAAATTAC TCGATGGCAT CGCAGGATTT GCCAAGTCGG CGCCGCAGGC GATTATCTTA GTAACCTTGG TTTCCCTCGC CGCCAGTTGG ATTAACTGGG GTTTTGGCTT AGTGGTTGGC GCCTTATTCG CTAAGGCCTT AGCGCGTAAA GTGCGTGTGG ATTACCGTTT ATTGGTCGCC AGTGCTTACT CGGGATTTGT GGTTTGGCAT GGCGGCTTAG CGGGCTCGAT TCCGTTAACT ATTGCCACTG CGGGGCATTT CTCAGAATCA CAAATCGGTA TTATCCCCAC CAGCGAGACC ATCTTCGCTA GCTTTAACCT GCTGTTAGTG CTGATTTTAT TTGTGGTGAT GCCACTGGTG AACCGCTTTA TGTTGCCCGA AGAGAAAGAC AGCATTTATG TCGATCCTAA GGCGCTTGAG GATGGGGGCG CAGACGATAA AGCGGCACAG TTAACGGCCA ATACGACTCG TCCTGCGGAT AAATTAGAAA ACAGTCGCTT GCTCGGTTGG AGTGTCGGCG GCGCGGGACT CGTTTACTTG GGCTATTACT TTGAGGTGCA GGGCGGCAGC TTAAACCTTA ATCTAGTCAA CTTCTTATTT TTATTCCTCG CCATTGTGCT GCATCAAACG CCACGCAGTT TACTGCTAAG CCTCAACGAA GCCATTAAAG GCGGCGCGGG TATCGTTATT CAGTTTCCCT TTTACGCTGG CATTATGGCG GTGATGGTGC AATCGGGGTT AGCCCAGAGT ATTTCCGAAG GTTTTGTGGC CATCGCTAGC GCCGAAAGCC TGCCATTTTG GAGCTTTATC AGTGCAGGGA TTGTGAATAT TTTCGTGCCT TCGGGGGGCG GACAATGGGC TGTGCAGGCG CCGATTATGT TGCCTGCGGC CGAAGCCTTG GGCGCCGATG TGGCACGTGT TGCCATGGCA GTGGCTTGGG GTGATGCGTG GACCAATCTT ATTCAGCCTT TCTGGGCGCT GCCAGTGCTA GCGATCGCCG GATTAAAAGC GCGGGATATC ATGGGGTTCT GTTTAATGCA GTTGCTGATA ACCGGGGTGA TTATCAGTAT CGCCCTAAGC TGGTTTTAA
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Protein sequence | MLTKAAKPLV KLVDRYLPDP YIFVLLLTLV VLISAVVAEQ KTPLEVINYW GDGFWALLSF SMQMLLVLVA GFMLASSPPI KKLLDGIAGF AKSAPQAIIL VTLVSLAASW INWGFGLVVG ALFAKALARK VRVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSES QIGIIPTSET IFASFNLLLV LILFVVMPLV NRFMLPEEKD SIYVDPKALE DGGADDKAAQ LTANTTRPAD KLENSRLLGW SVGGAGLVYL GYYFEVQGGS LNLNLVNFLF LFLAIVLHQT PRSLLLSLNE AIKGGAGIVI QFPFYAGIMA VMVQSGLAQS ISEGFVAIAS AESLPFWSFI SAGIVNIFVP SGGGQWAVQA PIMLPAAEAL GADVARVAMA VAWGDAWTNL IQPFWALPVL AIAGLKARDI MGFCLMQLLI TGVIISIALS WF
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