Gene Shewmr7_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2885 
Symbol 
ID4255719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3422241 
End bp3422720 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID638123562 
ProductHPP family protein 
Protein accessionYP_738926 
Protein GI114048376 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TAAGCCAACA GCAATTAAAA CCGGCACTGC TCGCAGGCGT AGGTGCCATG 
TTATGTATCA GTGCCTTAGC AAGCTTAGAG CAAATGAGTT CGCATTTGTT GTGGCTGATG
GCACCCTTTG GCGCCACTAT GGTGATTTTA TTTGCCCTTC CCGATAGCCC ATTGGCGCAG
CCAAGGAACA TTGTCTGCGG CCACCTACTC ACTAGTCTGA TGGGGCTTAT TATCCTTCAC
AGTGTGGGCG TCTCACCGCT GAGTTTAGGG TTGGCCGTAG GGGCGGGAAT CGCATTGATG
ATGCTCACCC ACACAGTGCA TCCTCCTGCT GGAGCAAACC CGCTAGTTAT TATGCTGACC
GCGCAAGGGT GGGATTTTTT ATATTCGCCA GTCGCCAGTG GTCTAGTGCT GATCTTATCC
TTTGGCTGGC TCTATCATAA TCTGCTGTGT CGACGCTCCT ATCCGCAGAA ATGGTTTTAA
 
Protein sequence
MKVISQQQLK PALLAGVGAM LCISALASLE QMSSHLLWLM APFGATMVIL FALPDSPLAQ 
PRNIVCGHLL TSLMGLIILH SVGVSPLSLG LAVGAGIALM MLTHTVHPPA GANPLVIMLT
AQGWDFLYSP VASGLVLILS FGWLYHNLLC RRSYPQKWF