| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2846 |
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| Symbol | |
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| ID | 4255996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3378461 |
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| End bp | 3380932 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123523 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738887 |
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| Protein GI | 114048337 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000571125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTTT TACAGCCTGT ATTTCGCTTA TCGCTTATTG CACTCGCCTG CCTCAGTGCT
TTACCACACA CAACCTACGC CGATGACACA CCTTCAGCTC GCGATGAAAA CGTCGAGCGT
ATAACGGTAT ACGGCAGACA AAACTCTGTG GTGAAAAACT CAGGACTTGC GACTAAGTCA
GATATGTCCT TAATGGAAAC CCCTGCGGCG GTTGTTATCG TTGACCAGGA GCTGATTAAC
AGCCAAGGAG TCGATAATCT GCAGGACTTA ATTCGCAATA TCAGCGGGGT GACTCAAGCA
GGCAATAACT ACGGCATTGG GGATAACTTA GTGATTCGCG GCCTCGGCGC AAACTACACC
TATGACGGCA TGTATGGCGG TGCCGGCCTT GGCAATACCT TTAACCCCAC TCGCTCCCTA
ACCAATGTGG AATCCGTGGA GGTTTTAAAA GGGCCTGCGA CTGGACTCTA TGGCATGGGC
AGCGCGGGCG GCGTGATCAA CCTGATTGAA AAGAAACCGC AATTTGAATC CAAACACAAA
ATAACCACAG AAGTTGACCA GTGGGATACC TACTCGCTCG CCATCGATAG CACGGGTGAG
ATCGCAGATG ATCTTGCGTA CCGCTTAGTC GCCAAAACCG CCCGCAGTGA AGGCTACCGT
GATTTAGGCG CCGACCGTGA TGAAGTGTTC GGCTCCCTCA AATGGGTATT AAGTGATAGC
CAAGATCTGA TGCTATCCGG CGCGTATATC AAAGACGCCA TTGCCGTTGA CTCCATCGGC
CATCCAATCC GTATCTACAA TGCCGATTCT GTCGGTGGCA AAACCGCGGG CGAAGTCACT
TGGCAAGATT TGATTAACGA TCCTAAGGGT CAAGGCATAC AGCTAACCGA CGAGCAGCGT
CAGCAATTGG CGGCATCACT CGCCAGTGAT GATGGTTTAA CTCCCTACTC CTTCGGTGAC
GCGGGATTAA TTTCTCCGAT GGCAAAAGAT AATGAAGGTG AAGAATTAAG ATTCAAGCTA
ACCCACAATA TCTACTTTAC CGATAATCTG TTCCTCAACC AGCAGTTGCA ATATCGCGAC
TACACTACAG GTTTTGCCCG TCAAACAGGG GCTTACAACT ATGTGTATTG GAAGCGTAAA
ATCAAGGTTG GCGGCGTATC GACTGATGTG ATTAACGAAG ATCCCCGCGC GCCACTGGTT
GAAAATGGCG TGCTCTATCC CTTTGCCGCC AGACGTCAGG AATACCGCCA ACTCGATGCC
GAAGAAACCT CATGGCAGTA TTTTGCCGAT CTACGTTACG ACTTCCAAAT CGGCAATATC
GACAACGAAT TACTGGTGAA TGCAAACTAC GAAGATCGCA ACATTCGCCT CGAGCAATTC
TCGATTTACG ATGCGGATCA AGTCATTAAA AACAAACAAG GCGAAGTGAT TTACCGTGGT
TCGCTACCGT ACATTTACTA TATCCGCAAT CCAAACTGGG GAACGGGTAA ATTTGCCGAC
TACGATCCGC TCAAAACCGC CAACTACAAC AAAAAAGTCA GCGCTTGGGG CTTAGGCGTG
CAACATGTGG GTTATTTAGG TTATGGCTTT ACCACTCGTG TTGGCGTGGC CTTTAACGAA
ATCAAACAGA GCTATGAGCA CTTAGGTTTG GATGAGCGCT ACAGCGCGAG TCAAGCGAGC
CCCACTCCTG AGGAAGATAG CAAAGATAAC GGTGTCACCT ATAACTTGGG CTTAACCTAT
ATGCCCATTG ATGATTTATC ATTTTTCGTC AATCACTCAA AGGGCCGCAC CGCCTATAGC
ATTTTAGGTT CTATCACTGG GGAAAATACC GACCGCGAAG ACTCAGAATC CGTTAGTAAC
GATCTCGGCA TGCGCTTTAA AGCCTTTGAC GATCAGATGC TAGCATCGCT GGTGTTCTTT
AAAAGCTCAC GCACTAATGT GCCTTACAAC AACCCAGACT ATAACGCTGG TGTGTCAGGT
GCCGAGGTGC CCGTGTACTT TTACGATGGC AGCGAAGATA CCCAAGGGGT CGAGTTGGAT
CTCAATGCCC ACTTAAACGA TAACTGGCGC ATCAACCTTA ACGGCATGTA TCAAGACGCT
AGGGATAAAC AAAACCCGAA TGACAAAGCC AACTACGACA GCCGCCAAAA AGGTGTGCCC
TATGTGACAG CCAGCGCTTG GGTAACCTAT GGTGCAGACT GGTTTGCCTT AACAAGCCCT
ATTGAGCTGA GTTTAGGCGC CAAGTATGTG GATGATAGAA GCACACACTC AAGCTCATTT
GGCATCCCAG ATGGTTATGT ACCGAGCTAC ACCTTAGTGG ATTCAGCCAT CAGCTATGCC
ACCGACTCTT GGAAGTTACA ATTGAATATT AACAACCTAT TCAATAAAGA CTATTACAGC
AAGGCGATGT TCCTCGGCGG TATGCCGGGC GAAGAGCGTA ATGTGAAGCT GCAATATAGC
TACAGCTTCT AA
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| Protein sequence | MPVLQPVFRL SLIALACLSA LPHTTYADDT PSARDENVER ITVYGRQNSV VKNSGLATKS
DMSLMETPAA VVIVDQELIN SQGVDNLQDL IRNISGVTQA GNNYGIGDNL VIRGLGANYT
YDGMYGGAGL GNTFNPTRSL TNVESVEVLK GPATGLYGMG SAGGVINLIE KKPQFESKHK
ITTEVDQWDT YSLAIDSTGE IADDLAYRLV AKTARSEGYR DLGADRDEVF GSLKWVLSDS
QDLMLSGAYI KDAIAVDSIG HPIRIYNADS VGGKTAGEVT WQDLINDPKG QGIQLTDEQR
QQLAASLASD DGLTPYSFGD AGLISPMAKD NEGEELRFKL THNIYFTDNL FLNQQLQYRD
YTTGFARQTG AYNYVYWKRK IKVGGVSTDV INEDPRAPLV ENGVLYPFAA RRQEYRQLDA
EETSWQYFAD LRYDFQIGNI DNELLVNANY EDRNIRLEQF SIYDADQVIK NKQGEVIYRG
SLPYIYYIRN PNWGTGKFAD YDPLKTANYN KKVSAWGLGV QHVGYLGYGF TTRVGVAFNE
IKQSYEHLGL DERYSASQAS PTPEEDSKDN GVTYNLGLTY MPIDDLSFFV NHSKGRTAYS
ILGSITGENT DREDSESVSN DLGMRFKAFD DQMLASLVFF KSSRTNVPYN NPDYNAGVSG
AEVPVYFYDG SEDTQGVELD LNAHLNDNWR INLNGMYQDA RDKQNPNDKA NYDSRQKGVP
YVTASAWVTY GADWFALTSP IELSLGAKYV DDRSTHSSSF GIPDGYVPSY TLVDSAISYA
TDSWKLQLNI NNLFNKDYYS KAMFLGGMPG EERNVKLQYS YSF
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