Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2713 |
Symbol | |
ID | 4255495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3208989 |
End bp | 3210917 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123391 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_738755 |
Protein GI | 114048205 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATGA GCCGTAGCCT CATTATTGAA ATTAAAGACT TGCCCGAGGA TTTGCCTCTG TCTTGGGCTC GGCTAGATAG TCAGTTTCGG GTGCAGTGCA TGAGCAGAGC ATTTTATCAA AGGTGCCAAC GCTCGGCGGC ACAAATCATC CATCAGCCAA TTTGTCAGTT ATTCTCCGAA TTTAATGCCG AACTTTGCCG CGATATTCTG AAACGCACCG ATGATTATAT TGGACTGGTG CTGCGGGATA ATCAGGGGAT ACGGGTGCAT TTTGGCCTGT ACGCTATTCC TGAGCAGGGC TGGCAGCTCA TTCTTTCCGA GATTAATTTT GAAGAATGGC CGCTCAATGG GCTGCATTCT GATTATCGCC AAGCGATTCA AGCGAGCGAT GCCTGGCTGC AACATATTGA TGACGTGATC CAATCTCCAC AGGAACAAGT GTTTAAGGTC GCTGTGGCTA AGGCGATTGC ATTAATGAAC AGCCACTACG GTTTTATCTT GCTGCATAAT GATAAATCCA AATCCCTCAC CTTAGTGGCC CGTTCGGACT ATCCTGCGCC CAAGGTCAAT CAAGCCGAAT TTGTAGAAGA AAACACTCAA GCCTCTGAGC TGGAAAGCCA GCTGTGGCAG GAATGTGCTA AAGACTACAA ACCCATTATT GAGAATACGT TAGCGGATAA TCGACCCGAT AATTTGTTGT TTGACCGCCT ATTACTGGGT GAGCGCTATC TTGCTGTGCC GATTGTTTTT CATAACCGCT TGGTGGGGAT AGTGTGTGTG CTGGGGCGAG ACGAACCCTA TAGCCGCAAT GATGCCCGTT CACTCCTGAC TTTTGCGAGT ATTTTATGGC ATTCGATTGA GCTTCCCCGC AGTCTGCGGG CGGTGTCGCG CCAGTCAAAA ATCATCAAAG CGCAAAAGGA GCAGTTATCC CAATCCTTGA CCCAGTTAAT CAGCGCAATT TCGGAGGCGC TTGAGTTAAA AGATGCCTAT ACCGCGGGGC ATCAAAAATC GGTTGCCCAG TTAAGCTATT TGATTGGTGA AAAACTCGGG CTTGAACCGC AGCGATTAGA AGGGCTTAAA ATCGGTGCGC TGGTGCACGA TATTGGTAAG CTTGCGATCC CGTCGCAGAT TTTGACTAAA CCCTCCAAAT TATCCAAAGA AGAGTACGCA TTAATCCAAA CCCATCCGTT GCATGGGGCC GAAATTGTTG CCGATGTGGA ATTCCCTTGG CCGATTAAGC AGATGATTTT ACAGCATCAC GAGCGGCTCG ATGGCTCGGG TTATCCCTTA GGCTTGAAGG ATAAAGCGAT CCTTTATGAG GCCAAAATCA TTGCCGTGGC CGATGTGGCC GACTCCATCT TATCCCATCG CCCTTATCGG CCCTCTATGG GACTGGCTAA AATGACAGAG GTATTAAAGG CGGGTAGAGG CACCTTGTTT GACGCGAAAA TTGTCGATAC TTGCTTAGAG ATTTTAATCA ATCGCGAGCT GAGTATCAGT GACCATATCG GCGCTGCGGT ATTGGAGCCA GTGGTGTCGG TGACGCTCGA TCATGAGCTT GCCGATATCA AACGTTTATT AACTGCGGCC CATGCCAAGG TGGCGGTGGT GCTCGATGAG AGCCATAAAA TCATCGGTGT GATCACTCAG CGCCTAGTGG ATTATTGGCT TAGCCCCTTG ATTGGCACAG CGGCGGAGCG GGAACACGAC AGGGCATTCC TGCGAAAAAA AGCCCATCAA ATTATGGAGC ACTCAGTGCC TTTGATTAGC GATGTCGCCA CCTCTGAAGA TGCATTGCAG CTGCTTAACC AAATGGATAC TGAGTTTTTG GTCGTGGTGA ATAAAGCTCA GCATGCGATA GGTGTGATTG GTTGGCGAAC CATCGCCATG GCAAACAAGG ATCGCCAAGA GGCGGAGCGG TTGATTTAA
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Protein sequence | MSMSRSLIIE IKDLPEDLPL SWARLDSQFR VQCMSRAFYQ RCQRSAAQII HQPICQLFSE FNAELCRDIL KRTDDYIGLV LRDNQGIRVH FGLYAIPEQG WQLILSEINF EEWPLNGLHS DYRQAIQASD AWLQHIDDVI QSPQEQVFKV AVAKAIALMN SHYGFILLHN DKSKSLTLVA RSDYPAPKVN QAEFVEENTQ ASELESQLWQ ECAKDYKPII ENTLADNRPD NLLFDRLLLG ERYLAVPIVF HNRLVGIVCV LGRDEPYSRN DARSLLTFAS ILWHSIELPR SLRAVSRQSK IIKAQKEQLS QSLTQLISAI SEALELKDAY TAGHQKSVAQ LSYLIGEKLG LEPQRLEGLK IGALVHDIGK LAIPSQILTK PSKLSKEEYA LIQTHPLHGA EIVADVEFPW PIKQMILQHH ERLDGSGYPL GLKDKAILYE AKIIAVADVA DSILSHRPYR PSMGLAKMTE VLKAGRGTLF DAKIVDTCLE ILINRELSIS DHIGAAVLEP VVSVTLDHEL ADIKRLLTAA HAKVAVVLDE SHKIIGVITQ RLVDYWLSPL IGTAAEREHD RAFLRKKAHQ IMEHSVPLIS DVATSEDALQ LLNQMDTEFL VVVNKAQHAI GVIGWRTIAM ANKDRQEAER LI
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