| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2708 |
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| Symbol | rpsB |
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| ID | 4255490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3202928 |
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| End bp | 3203656 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123386 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_738750 |
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| Protein GI | 114048200 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000765128 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0101527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAG TTTCAATGCG CGATATGCTC CAGGCCGGTG TCCACTTCGG TCACCAAACC
CGTTACTGGA ACCCAAAAAT GAAGCCATTC ATTTTCGGTG CTCGCAACGG CGTTCACATC
ATCAACCTTG AGCATACTGT GCCAATGTTC AATGAAGCGC TGGCTTTCAT CAGCAACGTT
GCTTCAAAGA AAGGTAAAGT ATTATTCGTT GGTACTAAAC GTGCTGCTGG CGAAGCGATC
AAAGAAGCTG CTATCTCTTG CGATCAGTAC TATGTTGATC ACCGCTGGTT AGGCGGTATG
CTGACTAACT GGAAAACCGT TCGTCAGTCA ATCAAGCGTC TGAAAGAACT GGAAAGCCAA
TCAGTAGACG GTACTTTCGA CAAGCTGACC AAGAAAGAAG CGCTGATGCG TACTCGTGAG
CTTGAAAAGC TGGAAAAATC TTTAGGCGGT ATTAAGAACA TGGGCGGCCT GCCAGACGTA
TTATTCGTTA TCGGCGCTGA CCACGAGCAT ATCGCTATTA AAGAAGCTAA CAACCTGGGT
ATCCCTGTTG TTGCAGTTGT TGATACTAAC TCTGCTCCAG ACGGTGTTAA CTACATCGTT
CCTGGTAACG ACGACGCAAT GCGCGCTATT CGCCTGTACA CTACTTCTGT TGCTGCAGCT
GCTAACGCTG GCCGTGGTCA AGATTTAGCT GTTCAAGCTG AGCAAGACGG TTTCGTAGAA
GCCGAATAA
|
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| Protein sequence | MTTVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNV
ASKKGKVLFV GTKRAAGEAI KEAAISCDQY YVDHRWLGGM LTNWKTVRQS IKRLKELESQ
SVDGTFDKLT KKEALMRTRE LEKLEKSLGG IKNMGGLPDV LFVIGADHEH IAIKEANNLG
IPVVAVVDTN SAPDGVNYIV PGNDDAMRAI RLYTTSVAAA ANAGRGQDLA VQAEQDGFVE
AE
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