Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2699 |
Symbol | |
ID | 4255481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3193092 |
End bp | 3193589 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638123377 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_738741 |
Protein GI | 114048191 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000309047 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00333472 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAAACC GTGCCCTGGT GACGTTGGCT TTATTAGGTG CACCTTTAGC GGCGCAGGCA GAAAATATTG CTGTTGTTGA TATGGGCGCT GTGTTTGAAC AGTTACCTCA ACGTGAGCAA ATCTCTCAAT CTCTGAAATC AGAGTTTGGT GATCGCATGG CTGAAGTTCA GAAAATGCAA GAAGAAATGC GCTCTCTGAT GGAGAAGCAG CAACGTGACG GCGCGTTAAT GAATGACACG CAAAAAACTG AGCTGGTTCG TAAAATGGAA GCGTTAAAAT CTGAATATCA GCTAAAAGGT AAAGCTTTGG ATGAAGACTT ACGTCGTCGC CAAGGTGAAG AGCAAAACAA ACTGTTAGTT AAGGTTCAAA AAGCCATTAA CACTATCGCT GAAAAAGAAA AATACGATCT AGTTTTACAG CGCGGTGCCG TCATTTATGT TAAGCCAAAT GCTGACATCA GTGGCAAAGT GGTTGAAGCC TTAAGCAAAG GCAAGTAA
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Protein sequence | MVNRALVTLA LLGAPLAAQA ENIAVVDMGA VFEQLPQREQ ISQSLKSEFG DRMAEVQKMQ EEMRSLMEKQ QRDGALMNDT QKTELVRKME ALKSEYQLKG KALDEDLRRR QGEEQNKLLV KVQKAINTIA EKEKYDLVLQ RGAVIYVKPN ADISGKVVEA LSKGK
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