Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2680 |
Symbol | |
ID | 4255585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3166618 |
End bp | 3168906 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123358 |
Product | decaheme cytochrome c |
Protein accession | YP_738722 |
Protein GI | 114048172 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.463028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000643351 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATGAAAA ACTACAATAA ATCTCTACTG GCACTAGCAC TCACTAGTGC CTTGTTTTTA ACCGCCTGCG GGGACGGCAA AGACGGGCAA GATGGTGCAC CCGGCACACC AGGAACTCCT GGAACGCCAG GAACACCTGG CACACCTGGT TTACCCGCTG GCTCGTTTGC TAAAACCGCT GAATCTATAA CCGATCTGAA ATTTACCCTC AGCCCTGCAG ACATTAAAGT CACTAGCAGC GAAGGCTTTA GTGTCAAATT CACCTTAACC GGAAAAAGCT CTGGCAAAGA TGTGCCCTTC ATGGGACTCG ACAAAATTGC CCTTTATTCA TTAACGGCGA ATGAAAACAC CTCGGGCACG GGCGCTCCCA TTCAGTGGCA AAACAATGCC ATGGCAAACA ATGCGGGCAG CTCATTAACT TGTACACTCA ATGGCCTAAA CGGCACTAAG AATGCGTGTA CCTTAACCGA AGATACCGAA AACCCAGGTA CTTACACAGC CACTTGGACC TATGATGGCG CTGCGCCCAT CATCAATCCA AACGATAATC CAAATGCGGT GCATAGAGTC TTCGTTCGCG CTTACAACAT TGTCAACGCA GCTGGCGTAG CCTTGTCAGA TAAAGTGCTC TCGGTACCTG TTGATTTTAT CCCTGCAACC GATGAGCTTG CCGCATCAGG CAAAGACACA GTATCCAGCG CTGCATGTAA AAACTGTCAC GGTGAAGTGG ACGGCCATAT CGCTAAGATT GAAGCCCACC ATAACTACCA AGACGTTAAA AACTGCGTAA CCTGTCACAA CCCAGAGCAA GTCCCAAGCG ATGCGCAGCT CGCTGAAGGC TGGGTATTTG ATTTCGCGCC GATGATCCAC CGTATCCATG CGGGTGAACA CAATGCGGAC TACCTGTCTG GTGAAGCGAA AGAGTACTTC GGTGAAATTG GTTTCCCATC AGACTTGAAA GAATGTAAAT CCTGTCACGA TGGTGCACCT AGCTATAACA CCAATATCTA CGCTCAGGCT TGCGTGGGTT GTCATATCAA TGTCAACTTC GCAACCGGTG AAAACCACTC AGAATTTGGT TTGGCTCAAG CCGATGATAC TCAATGTAAA TCCTGCCATG GCAGCGGTAG CTTAACGCCA GAAGCGGTTC ACAGTGTTGG TAAACGTGCT GAATACGGCC CATTAATGAC CGTCGACTTT ACCAGTGCAA CGCTGGGCAC TTCAGCAACA CTAGGTATGC AAACTCTGAC ATTGAAAGCC AATGTCACAC TCAATGGCGC GCCTATTGCT GATGGTACTA GCCTGAAAAC CTACAATGCC ACCAGCAACC CAACAGGTAT GTTTGCGGCA AACGGTCTGC TACTGGGTAA TGTGGCGACA GATGGTACAG TGTACTCATG GCGCGATGTT AAGCCTTTAG CCATCAGCAT GAAACTGGAT AACGGTACTC TGTCAGGTGG TGTATTAACC TTCGTGAAAG ATATTCCAGA TGCACAAGCA ACTGGCACTA TCTACGTCGG TTCTGAAGCC AACTTCTGTG CGAAAGCGGG TAAAGCGGTG AGCTGTAATA CCGACGGACT TGAATATGGT CCAACAAGCC CTGTGGGTAA CATCTCTGCG GTTAAATTCT TCAACTTAAG CGGTGGCACT CCAGCTGTGG CCCGTATGAA GGATCCAGCG CGGATTACGG TTGAAGAAGC AAAATGTAAC GCTTGTCATG GCAGCTTAGA CTATGCGAAA GGCTACAGAC ACGGGGTTTA CACCTTCGAT CAATGTATGC ACTGTCACAA CGATACCACT GGCGCTTCAG GTCATGGTCA AACTGGCTAC AAAGGCGAAG ATGGCAAGTT AGTCGTCACT CCTGAAGTGA CCTTCAACAA CAAAGATCTG TTCACCGTGG CTCACCGCTT CCACAGTGGT AACTTCGGTG TTGTAGAAGG CATCTTCCGC AATGCAGCTG GCGAACTAGA AGGTTATCCA TCACCCGAAA CCGCATGTTC TGCCTGTCAC AAAGATGGCG CAACCCTGTT CGCAACTGAT GGTGGCTTAA CTTCAGGCAA ACGTTCTATC AAAGTGGGCA GTAACTACAT TAGCCCTGTG GCTGAATCCT GCCGCACCTG TCACGCTCAC TCAGATGCAG CTGCAGTGGC TCACTTTAGA AGTAACGGCG CGATTGTAGA AGCGGATGCT GCAACCGATC CTAACCTACC AGTAGAATCA TGCGCGACCT GCCATGCTGA AGGTAAAACC TATGGCATAG ATAAGGTACA CGCAGAGGTA GCACACTAG
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Protein sequence | MMKNYNKSLL ALALTSALFL TACGDGKDGQ DGAPGTPGTP GTPGTPGTPG LPAGSFAKTA ESITDLKFTL SPADIKVTSS EGFSVKFTLT GKSSGKDVPF MGLDKIALYS LTANENTSGT GAPIQWQNNA MANNAGSSLT CTLNGLNGTK NACTLTEDTE NPGTYTATWT YDGAAPIINP NDNPNAVHRV FVRAYNIVNA AGVALSDKVL SVPVDFIPAT DELAASGKDT VSSAACKNCH GEVDGHIAKI EAHHNYQDVK NCVTCHNPEQ VPSDAQLAEG WVFDFAPMIH RIHAGEHNAD YLSGEAKEYF GEIGFPSDLK ECKSCHDGAP SYNTNIYAQA CVGCHINVNF ATGENHSEFG LAQADDTQCK SCHGSGSLTP EAVHSVGKRA EYGPLMTVDF TSATLGTSAT LGMQTLTLKA NVTLNGAPIA DGTSLKTYNA TSNPTGMFAA NGLLLGNVAT DGTVYSWRDV KPLAISMKLD NGTLSGGVLT FVKDIPDAQA TGTIYVGSEA NFCAKAGKAV SCNTDGLEYG PTSPVGNISA VKFFNLSGGT PAVARMKDPA RITVEEAKCN ACHGSLDYAK GYRHGVYTFD QCMHCHNDTT GASGHGQTGY KGEDGKLVVT PEVTFNNKDL FTVAHRFHSG NFGVVEGIFR NAAGELEGYP SPETACSACH KDGATLFATD GGLTSGKRSI KVGSNYISPV AESCRTCHAH SDAAAVAHFR SNGAIVEADA ATDPNLPVES CATCHAEGKT YGIDKVHAEV AH
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