Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2675 |
Symbol | |
ID | 4255580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3161865 |
End bp | 3162773 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123353 |
Product | UDP-glucose pyrophosphorylase |
Protein accession | YP_738717 |
Protein GI | 114048167 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0250245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000446914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAACAAC ATCAAATTCG TAAAGCCGTT ATTCCTGTCG CTGGACTTGG CACTCGTATG CTTCCTGCGA CCAAAGCTAT CCCAAAAGAA ATGTTACCCG TTGTTGATAA GCCATTGATC CAATACGTGG TTAGCGAAGC CATTGATGCG GGTATTAAAG AAATTGTCCT CGTAACCCAC GCCAGTAAAA ACTCTATCGA AAACCATTTC GACACCAGTT TTGAATTAGA AGCGCAATTA GAGCGCCGCG TGAAGCGTCA ATTACTCGAA GCGGTTCAAT CCATTTGCCC GAAAGACGTC ACAGTGATCA GTGTGCGTCA ATCCCAAGCG AAAGGTTTAG GCCACGCGAT TTTATGTGCT AAATCCGTGG TAGGTGATGC GCCGTTTGCC GTATTGCTGC CGGATGTGAT TATCGATGAT GCCAGCTGCG ACCTCAAAAC CGACAACCTT GCCGCTATGG TCAATCTGTT TGATGAAACC CAAGTGGGTC AAATCATGGT TGAAGGCGTG CCACATCATC TAGTGAACCA ATACGGTATT GCGGATGTGA ATGGCCACGA TCTGCAACCT GGTGAGTCTG AGCCATTGGT CGAACTCGTT GAAAAGCCAC CGGTTGATGA AGCGCCATCT AACTTAGCTG TAGTGGGTCG TTACGTGCTA CCTGCGGCAA TTTGGCCACT ACTAGCCAAA ACTCCTGCTG GCGCGGGTGA TGAAATCCAA TTAACTGACG CGATTGCGAT GTTAATGAAG CAAGAAACCG TAAACGCTTA CTACATGCAA GGTAAGAGTC ACGACTGCGG TAACAAGCAA GGTTATATGC GTGCTAACGT AGAATACGCC CTGCGCCACA GCGAAATCGG TGAAGATTTT GCCCACTATT TAAAGACAGT TGTAAAAGGA ATTAAATAA
|
Protein sequence | MKQHQIRKAV IPVAGLGTRM LPATKAIPKE MLPVVDKPLI QYVVSEAIDA GIKEIVLVTH ASKNSIENHF DTSFELEAQL ERRVKRQLLE AVQSICPKDV TVISVRQSQA KGLGHAILCA KSVVGDAPFA VLLPDVIIDD ASCDLKTDNL AAMVNLFDET QVGQIMVEGV PHHLVNQYGI ADVNGHDLQP GESEPLVELV EKPPVDEAPS NLAVVGRYVL PAAIWPLLAK TPAGAGDEIQ LTDAIAMLMK QETVNAYYMQ GKSHDCGNKQ GYMRANVEYA LRHSEIGEDF AHYLKTVVKG IK
|
| |