Gene Shewmr7_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2672 
Symbol 
ID4255577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3158491 
End bp3160029 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content51% 
IMG OID638123350 
Producttranscriptional regulator, TyrR 
Protein accessionYP_738714 
Protein GI114048164 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG3283] Transcriptional regulator of aromatic amino acids metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0181063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0037784 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTTGG AAGTTAGCTG TCAAGATCGC GTGGGTTTAG CGAAAGACAT CTTAGTCGTG 
TTAGAACGTT ATGGCATTAA TCTCATCGCC ATCGATGCCA GTAACCAGGG CTTTCTCTAC
CTGCAATTTG CCGAAATTAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA
GTGGAGAGTG TTCACGATGT GCGAACTGTG TCGTTTATGC CTTCGGAGCA GGAACACTAC
GCCTTAAAAA CCCTACTCAA AACCCTCCCT GACTCAGTGT TCTCCATCGA CGTGAAGGCG
CGCATTCGTA TCGTCAACGA GTCGGCGCTA CTCAATATGG GCATGGGGGA GCACGAAGTG
CTCGATGAGT CCTTAAACCA TTGGGTGCAA GGGTTCAACT TCAGCCGCTG GCTCAGTGAG
AGCCAAGTGT TGCCGCAGGC GGCGCGGGTC AATATCGGCC AAAACGAATA TTTGGCCGAA
ATGTTACCGA TTTACCTACC CGATGAGGAT GATAAGACTA TCCTCGTGGG CGCAGTCGTA
TCGCTTAAAT CGCCGGCGCG GGTCGGTAAA CAATTCAATG CACTGCAAAA TCAAACCGCG
GGCTTTGAAA ATGTGTTAGC CAGCAGCGAC AAGATGAAAG AAGTGCTGAA ACAAGCCCGC
CGCATGGCGC AGCTCGATGC GCCGCTATTA ATTACTGGCG AGACTGGCAC GGGCAAAGAG
CTAATGGCTC GAGCCAGCCA TGATGCCAGC ATGCGCCGCG AGAAACCTTT TATCGCCATT
AATTGCGCGG CACTGCCCGA TAGCGCCGCC GAAGAGGAAC TCTTTGGCTA CGTCAGCCAA
GGCAAAGTGA TTAAGCGCGG CTTTTTTGAA GAAGCGAAGG GCGGCACAGT GTTCCTCGAT
GAAGTGGCCG AAATGTCTAA GGCGGCGCAG GTTAAACTGC TGCGGTTATT ACAGGATGGC
ACCTTTAGAC GCATTGGCGG TGACGAAGAA GTTCGCGCCG ATGTGCGGAT CATCTGCTCA
ACCCAGAAAA ACTTAGCCGA GTTGTGTCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT
CGCATCCATG TGCTTAGCTA CCATATTCCA TCACTGCGTG AGCGCAAAGT CGATATCATT
CCGCTGACGG AGATGTTCCT CGAGCACTAC AGTCAGCAAC TCTCGAGCCC GGTGAGACGA
ATTTCGGCCC AATGCCGCGA TCATTTATTG ACTTATGCCT GGCCGGGTAA CGTGCGTCAG
CTTAAGAATG CGGTCTTTAG GGCGGTATCT ATGTGGGATG GCTCGGGCGA GTTGACCGTT
GAGCAACTTA AGTTGCCATC CTACGCCGAA GGTTTTGGCT ATTTCGATAA TGCTTTTGAA
GGCAATCTCG ATGATGCGAT GAAGCAATTT GAGGCCAGCT TGCTGCGCCG CTTATATCCG
GCTTACCCCA GTACTCGCCA ATTGGCGAAA AAATTAGGGG TGTCCCACAC GGCTATAGCC
AACAAACTCA GGGAATACAA GATAGCCAAG CCAAAGTAA
 
Protein sequence
MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK 
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNMGMGEHEV
LDESLNHWVQ GFNFSRWLSE SQVLPQAARV NIGQNEYLAE MLPIYLPDED DKTILVGAVV
SLKSPARVGK QFNALQNQTA GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVIKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSGELTV EQLKLPSYAE GFGYFDNAFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK PK