Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2603 |
Symbol | |
ID | 4257485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3077024 |
End bp | 3077809 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123281 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_738645 |
Protein GI | 114048095 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.252662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTT TGAACACGAT AGAAAGGCAG CAGGAAATTG TGCGAATGAC ACAGTTACAG GGAAAGGTCT CTGTTGCCGA ACTCGCAGAA CACTTTGGGG TATCTGAAGT CACGATCCGC AGCGATTTAG CCATGTTGGA TCAAAAGCAG TTACTGGTGC GCTCCCGAGG CGGCGCTATG GTCAACAGCG AGTTGATCCG GGAGTTATCA CTGAAGGAGA AGGGCAGTTG CCATTCGGCC TTAAAGCAAG AGTTAGGTAA GGCTGCGGCG GCCTTGGTGC AAAACGGCGA TCGCTTATTG CTCGACTCGG GGACGACCAC CCAACAGGTG GCGGCGAACC TGATGGAGCA TAAGGATCTG ATCGTGATGA CCAATGGCCT GAATATCGCC ACCGAATTGG CTAAGGCTGA CGAAGTGGAG GTGATGTTAA CCGGCGGGCT GTTACGTAAA AAATCCCTGT CGTTCTACGG CAATATCGCC GAGAACAGCC TGCGGGATTA CAACTTTAAC AAGTTGATTT TAGGGGTAGA TGGTTTCGAT TTGCGGGTGG GATTAACCAC TCACTTTGAA AAAGAGGCCA GCCTCAACCG AATGATGTGT GAGATAGCGA GTGAAATTAT CGTTGTGACT GACTCATCAA AGTTTGATCA ACAAGCATTC CATGTTATTT GCAGCAGTCG CCGTATTACG CGTCTAGTGA CAGATACCGG GATCCCAGAG CGCTATGTTG ATGAATTAAC TAAACAAGGT GTGCAATTAC ACCTCATTGA GAAAGCTAAT TTATAA
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Protein sequence | MSTLNTIERQ QEIVRMTQLQ GKVSVAELAE HFGVSEVTIR SDLAMLDQKQ LLVRSRGGAM VNSELIRELS LKEKGSCHSA LKQELGKAAA ALVQNGDRLL LDSGTTTQQV AANLMEHKDL IVMTNGLNIA TELAKADEVE VMLTGGLLRK KSLSFYGNIA ENSLRDYNFN KLILGVDGFD LRVGLTTHFE KEASLNRMMC EIASEIIVVT DSSKFDQQAF HVICSSRRIT RLVTDTGIPE RYVDELTKQG VQLHLIEKAN L
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