Gene Shewmr7_2595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2595 
Symbol 
ID4257477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3068611 
End bp3069306 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content54% 
IMG OID638123273 
ProductAzlC family protein 
Protein accessionYP_738637 
Protein GI114048087 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCAC TCACCATTGC CGTGGTGCCT TGGGGGATCC TCGCAGGCTC GTTCGCGATA 
GAGGTCGGAC TAACACCAAT AGAAAGTCAG GCCATGTCGG CGATTATTTT TGCGGGCGCC
GCGCAATTGG TCGCGCTCGG CATGGTTAAA GCGGGGATTG GTCTGTGGAG CATTTTAATC
ACGACTTTGC TGATCACCTC GCGTCACTTG CTCTACGCCA TGGCGATGCG CAGTCAAATC
AGTCCCTTAC CACTCAAATG GCGCCTCACT CTGGGCTTTT TATTGACCGA TGAACTCTTT
GCCATCGCTA ACCAAGGCAA GCTGCACAAA TTCGATCCTT GGTACGCGCT GGGCGGCGGC
CTAAGTTTTT ACCTCGGCTG GAACCTCGCC ACCCTGCTCG GCATTATCGC TGGCAATGCT
ATCGATAACT TAGGCGAATT AGGGCTAGAC TTTGCCATTG CCGCGACCTT TATTGCCCTC
GTAGTCCCGA CGGTGAAAAA GCCGTCAATC CTAGTCTGTG TGCTGGTTTC GCTCACCTTA
GCTGTGGTGT GTGCCGTGCT GAATATTCAG GCGGGACTGT TAATTGCCGC CCTATCGGGG
ATGAGCGCTG GCGTGCTCTA TGCCAAAGTC ACGGGCGAGG ATAAGCCAGC CCCCAAAAAT
GACACGACTG CCACCCAAGT TGAGGAAACC CTATGA
 
Protein sequence
MLPLTIAVVP WGILAGSFAI EVGLTPIESQ AMSAIIFAGA AQLVALGMVK AGIGLWSILI 
TTLLITSRHL LYAMAMRSQI SPLPLKWRLT LGFLLTDELF AIANQGKLHK FDPWYALGGG
LSFYLGWNLA TLLGIIAGNA IDNLGELGLD FAIAATFIAL VVPTVKKPSI LVCVLVSLTL
AVVCAVLNIQ AGLLIAALSG MSAGVLYAKV TGEDKPAPKN DTTATQVEET L