| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2584 |
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| Symbol | |
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| ID | 4256666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3055951 |
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| End bp | 3057183 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123262 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_738626 |
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| Protein GI | 114048076 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0253074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGTTT TGGATCAACA CATCGCTAAA CAAATTGTGA GTCGCACCAT GAAAATCATT
GGGCACAATA TCAATGTGAT GAATGGTCAA GGCGTGATCT TAGGTTCCGG CGATCCCAAA
CGTATTGGCT CGACCCACGA GGGCGCGCTG CTTGCCATCG CCCAAAACCG CAATGTGGAA
CTGAGTGAAG AAGTGGCCTC AGGCTTACAT GGCGTCAAAC CCGGCATCAA TTTGCCCTTG
CATTATCAAG GGCAAATTAT TGGGGTGATT GGTATTACTG GCGATCCGGC CGAGTTAACC
CACTACGGTG AGCTGTTAAA AATGACCGCC GAGATGATTG TCGAACAAGC CAACCAGCAG
GATCAGCTGC AGTGGGAAAA TCGTCAGCGT GAAGAATTTA TTTTGCAGTT GATTAAGGCG
CAAACCGATG ACGATGAACA ATTGCATCGC TGGGCCAAGC AACTCGATAT CGATATCAGT
CTGCCGCGAG TGGCCGCTAT TATTGAAGTC AGTGAAAAGC AATCCACGCC AACCCAGCAA
AAATCCGCTG CGTTTTCTTC AGTAGTCCAG AGCGAGCAAA GTACAGACGA GCGTAATCCC
AGAGTCAGCG AAATCCTCAA GCAAGTGCTG CATTTACTGC AAAATCCCGA TCGCGGCAAC
TTGATAGCCA TGACCTCGAT GTCGCAATTG GTGATCTTAA AACCAGCCTT TCTGGATGGT
AAACAATGGG ATCCCGAGCT TGAAAACCAG CGTATCGATA AACTGCTGCA GCGCTTACCG
GCGCAAATGG ATTTAAATTT TAAAATCGCC CTTGGGCATT TTTTCCCTGA AAAAGGCGGC
ATTGCACGCT CCTACCAAAC CGCGCAGGAA ACCTTGAACT TAGGCAAGCA GCTTAACCCC
GAGGGCACTA AATACCTGTT TGAAGACTAC TCCTTACAAG TGCTGTTATC GGGACTCAAG
CATGATTGGC GTGGTCAAGC GCTGGCCAGC CCCTACCAAC AGTTAGCCAA GGCCGATAAA
AATGGTCAGC TACGCAAAAC CCTAGCCGCC TATATCACTC ATTTTGGTGA TGCACAGCAA
TGCGCTAATG CGCTGTTTAT TCACCGAAAT ACCCTAAGAT ATCGGTTAGA TAAAATTCAG
CAACTCACCA AGAGTGACAT CCATTCCCTC CACGGATTGT TAAGCCTGTA CCTTGGTCAG
TTGATTGACT CCTCAAATTA TCGACTGAAT TAA
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| Protein sequence | MYVLDQHIAK QIVSRTMKII GHNINVMNGQ GVILGSGDPK RIGSTHEGAL LAIAQNRNVE
LSEEVASGLH GVKPGINLPL HYQGQIIGVI GITGDPAELT HYGELLKMTA EMIVEQANQQ
DQLQWENRQR EEFILQLIKA QTDDDEQLHR WAKQLDIDIS LPRVAAIIEV SEKQSTPTQQ
KSAAFSSVVQ SEQSTDERNP RVSEILKQVL HLLQNPDRGN LIAMTSMSQL VILKPAFLDG
KQWDPELENQ RIDKLLQRLP AQMDLNFKIA LGHFFPEKGG IARSYQTAQE TLNLGKQLNP
EGTKYLFEDY SLQVLLSGLK HDWRGQALAS PYQQLAKADK NGQLRKTLAA YITHFGDAQQ
CANALFIHRN TLRYRLDKIQ QLTKSDIHSL HGLLSLYLGQ LIDSSNYRLN
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