| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2555 |
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| Symbol | |
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| ID | 4257454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3015968 |
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| End bp | 3016975 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123230 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_738597 |
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| Protein GI | 114048047 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.769115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0702195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAC TTGACGTTAG AAACCTGACC ATTGAGCTCG ACACGCCCCA CGGCAGAGTC
CGCGCCCTTG AGAAAGTGAG TTTGACCCTC AACGCGGGGG AAATCCACGG TCTCGTGGGA
GAATCAGGCT CGGGCCGCAG TCTGCTTGCC AGAGCCATTC TTGGGATCCC AGGCCCCAAT
TGGACCATTA CCGCCGACCG CATGATGTGG GATGGTAATA ATCTGATGGC CATGACCTCG
AAGGAGCGCC GTAATCTGAT GGGTTCAGAT ATGGCGATGA TCTTCCAAGA CCCATCTGGC
AGCCTTGACC CTTCGCAAAC CGTGGGTAGC CAGCTGATGC AGGCCATGCC TAAGAATCCT
AAGGCTTACT TTTGGCAAAA ACACAAACAT GCCAAACAGA CAGCGCAAAA ATGGCTGCAT
AAGGTCGGGA TTAAGAATCC GCAAAAGGTC ATGTCTAGCT ATGCTTGGGA GCTTTCGGAA
GGCGAATGCC AAAAAGTGAT GATTGCCATG GCGATCGCCA ACCAACCGCG ACTCTTAATT
GCCGATGAAC CGACAAACTC GATGGAGCTG AGCACGCAGG CACAGATTTT CCGTCTGCTA
TCACAGCTTA ACCAGCTACA AAACGTGTCG ATTTTAATCA TCAGCCACGA GCTTGAGACC
CTAGCACAAT GGTGCGATCA CCTATCCGTG CTCTATTGCG GTCAAGTCAT GGAATCTGGC
CCAACGGAAG AACTGATCAA TCAGCCCTAT CATCCTTACA CTAAGGCACT CTTGGATAAT
ATGCCGGATT ACTCGGGGAT AGCGGCACAT AAGGCGATTA TGCCAACCCT GCCAGGCTCG
GCCCCCGCCC TACAGCATCT GCCCATTGGT TGTCGCCTTG GGCCTAGATG CCCAGAGGCA
CAAAAGAAAT GTGTTAATCA GCCAAGTTTA AGTCATTTAC GAGACCGCTA CTTTGCTTGC
CATTTCCCTT ATCACGGTGA AACGACAAAT GACGACCCCA CTGCTTAA
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| Protein sequence | MPLLDVRNLT IELDTPHGRV RALEKVSLTL NAGEIHGLVG ESGSGRSLLA RAILGIPGPN
WTITADRMMW DGNNLMAMTS KERRNLMGSD MAMIFQDPSG SLDPSQTVGS QLMQAMPKNP
KAYFWQKHKH AKQTAQKWLH KVGIKNPQKV MSSYAWELSE GECQKVMIAM AIANQPRLLI
ADEPTNSMEL STQAQIFRLL SQLNQLQNVS ILIISHELET LAQWCDHLSV LYCGQVMESG
PTEELINQPY HPYTKALLDN MPDYSGIAAH KAIMPTLPGS APALQHLPIG CRLGPRCPEA
QKKCVNQPSL SHLRDRYFAC HFPYHGETTN DDPTA
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