| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2542 |
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| Symbol | |
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| ID | 4257441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3003257 |
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| End bp | 3004159 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123217 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_738584 |
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| Protein GI | 114048034 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00205391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCCAT TGGTTTATCA CGCCAGCTAC TCCAAGCTGG CGTTACCCTC CCACCACCGC
TTTCCTACGA CCAAATACGC ACGTCTTTAT CAGTATCTGC TCGATAATCA ATTGGCTGTT
CCGGCTCAAT TCCATACTCC CTCGCCGATG ACGGCAGAAG ATGTAATGCA GGTGCATCAG
CAAGATTATG TCGAACAATT TATCCAAGGC AGCTTAAGCA GTACGGCCTT AAGACGCATC
GGCTTTCCAT GGAGTGAAGC CCTGGTCGAG CGCACTTTGC ACTCGGTATC GGGGACGAGT
TTGACCGCAC ATTTAGCCAT GCAAACCGGT ATCGCCCTTC ACTTAACGGG CGGTTATCAC
CATGCTCATT ATGACTTTGG CAGTGGTTAC TGTATTTTCA ACGACTTGAT TATCGCCGCC
CGTAAACTAA TGGCCGAGCA GCAGTTACAT AAGGTGCTGA TTTTTGACTG TGACGTGCAT
CAAGGTGATG GCACAGCCAC CCTCAGCCAC AAGCATCAAG GCATTATCAG TTGCTCCATC
CACTGCAAAG AGAATTTCCC CAGTCGTAAA CAGCAGTCAC ACTATGATAT TGAACTGACG
AAAGGTGCAG ATGACAGCGC TTATCAGGAA ACCGTCGAAC AGACTCTCGA ACTGCTTATT
CGCCTACATC AGCCAGATCT CATCCTGTAT GACGCTGGCG TCGATATTCA TCAAGATGAT
GACTTAGGGC ACCTAAAGAT CAGTAAGCAG GGATTGTATC AACGTGATTT AACCGTGTTA
TCTATGGTAA AAGCAGCAAA TATTCCTGTT GCGGCGGTAA TTGGCGGCGG CTACAGCCGA
GACGAACTAC AATTAAGCCA AAGACATAGC CAACTTTTTA TTGCAGCCAA CCATTTGTGG
TAG
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| Protein sequence | MIPLVYHASY SKLALPSHHR FPTTKYARLY QYLLDNQLAV PAQFHTPSPM TAEDVMQVHQ
QDYVEQFIQG SLSSTALRRI GFPWSEALVE RTLHSVSGTS LTAHLAMQTG IALHLTGGYH
HAHYDFGSGY CIFNDLIIAA RKLMAEQQLH KVLIFDCDVH QGDGTATLSH KHQGIISCSI
HCKENFPSRK QQSHYDIELT KGADDSAYQE TVEQTLELLI RLHQPDLILY DAGVDIHQDD
DLGHLKISKQ GLYQRDLTVL SMVKAANIPV AAVIGGGYSR DELQLSQRHS QLFIAANHLW
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