Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2538 |
Symbol | dinG |
ID | 4257419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2999035 |
End bp | 3001107 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638123213 |
Product | ATP-dependent DNA helicase DinG |
Protein accession | YP_738580 |
Protein GI | 114048030 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.536241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000322681 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTTACCTG ACAACGTAAA AAACCAGATC CGCGCTATCT ATAAAGATAT TGCCGCCGCT TTGCCTAATT TTAGGCCACG CCGCGAGCAA AATTTTATGG TGGCAGAAAT CTCTAAGACT CTTGCTGGCG ACTATGACAA AGATAGACGC ATCATAGTGG TCGAAGCGGG TACGGGGATT GGTAAATCAT TGTCTTATAT TTTAGGCACC ATTCCACTTG CACTCGCGAG TAAGAAAAAG GTCTGTATCG CCACAGCAAC CGTGGCGCTG CAGGAGCAGT TGCTGCACAA AGACTTACCA TTTTTTCTCG AACAATCAGG GTTAAACTTT CGCTTTGGTC TGGTTAAAGG GCGCCAGCGT TATGTCTGTT TATCCAAGCT TGCAATGTTA ATCGGCGATG ATAACAGTAC CCAAATGGCC ATGTGGCAAA CAAAGCCAGA TAACAGCCAA ATTGCCATGC TGCAAGAGCT GCTCAGCGAC TTTAATGAAG GCCGCTGGAA CGGTGAAATC GATACGTTAT CGACACCGAT ACCGGACCAT CTCTGGCAAC AAATCGCCTG CGATAAACAC AGTTGTCATC GGCAACTCGC CAGTCATCGT AATTGCCCGT TTCACAAGGC CCGTGAGGAT GTGGATACTT GGGATGTACT GATCGCCAAC CACAGTTTGC TGTTTGCCGA CTTAGAGCTG GGTGGCGGGG TGATTTTGCC CGATCCAGAA GACGTATTTT ACGTCATTGA CGAAGCCCAC CACTTACCAA TCGTCGCGCG GGACTTTTCT AGCGCACAGG CAACGCTTAG AGGCGCCGCC GACTGGCTCG AAAAAGTCGG CAAGACTAGC GCCAAATTAC AAAATCAGAT AAAGAGCAAC AATATCATCG CCCCAGCACA GGCTATGCAG GATCATATCG GTGACTTAAT CGCTCAACTC AATCAAGTCG CCCATTTCTG TGATACCCAG ACCAAGCAGT TTGCTAATCC TGAGAGCCGC TATCGGTTCG AACACGGCAA ATTGCCCGAT GCACTAAAAA TCCCCGCCGA GAATCTCGCG GCCACCTCCA ATCTCGCCCT TAAGCAATTT AACAAGATGC AGTTATTGCT GGCCGAGGCG ATAAAAGATG GCGACATTCC TAAGCATCAA GCGGAGGCGT TACAGGCCGA AATGGGCTTT ATGCTGCAAC GACTAGAGAA CCTGCAAAAA CTCTGGAAGA TGATGGCCAA AGAAGACTCC AATAAAGGCG CCCCAATGGC CCGTTGGATC GAGTTAATTA CGGGCAAACA GGTCGATTAT CTGTTTAGTG CCTCGCCAAT TGAAGTCGGT TTTATGCTCG AATCTATGCT GTGGCAGAAG GCCGCTGGCG TCGTTCTGTG TAGCGCCACG CTGCGGGCGC TGAATAACTT CGACCATTTC GCCCATCAAG TGGGATTATC GGTAAAGGAT GGTAGTCGTT ATCTCGCCCT GCAATCCCCC TTTGATTATC CCAATAACGC CACGCTCTAC TTACCTAAGA TGAGAACCGA GCCGACGGAT GATGCCTATA CCGCAGAGCT TGCCGAACAA ATTATTGAGC TGATTGAAGG CGAAATGGCG ACCTTAGTGC TGTTTGCTTC TTACTGGCAA ATGGAGAAAG TTGCAGAGTT GCTCGAGGGC AAACTCACGC AGGAAATCCT TATTCAAGGC AATGCGCCGC GCCAGCAATT GCTTGAGACC CACAAAGCCA AGTGTGACAA AGGTGAGCCG AGTATTTTGT TCGGCACAGG CAGTTTTTCT GAAGGTTTAG ACTTACCCGG AGATTACCTC ACCAATCTCA TCGTCACTAA GCTGCCCTTT GCGGTGCCGA CCTCGCCCGT TGAGCAAGCC CATGCTGAAT ATGTGAAAAT AAAGGGTGGA AATCCGTTTT TGCAACTCAC CATTCCAGAT GCATCGCGAA AGCTTATCCA AAGTTGTGGT AGATTACTGC GTAAAGAGCA GGATTATGGC CGAGTCACTA TCCTTGATAG ACGATTAGTG ACCAAACGTT ACGGCAAATC CTTGCTAGAC GCACTGCCCC CCTTTAGACG AGTCATTGAG TAG
|
Protein sequence | MLPDNVKNQI RAIYKDIAAA LPNFRPRREQ NFMVAEISKT LAGDYDKDRR IIVVEAGTGI GKSLSYILGT IPLALASKKK VCIATATVAL QEQLLHKDLP FFLEQSGLNF RFGLVKGRQR YVCLSKLAML IGDDNSTQMA MWQTKPDNSQ IAMLQELLSD FNEGRWNGEI DTLSTPIPDH LWQQIACDKH SCHRQLASHR NCPFHKARED VDTWDVLIAN HSLLFADLEL GGGVILPDPE DVFYVIDEAH HLPIVARDFS SAQATLRGAA DWLEKVGKTS AKLQNQIKSN NIIAPAQAMQ DHIGDLIAQL NQVAHFCDTQ TKQFANPESR YRFEHGKLPD ALKIPAENLA ATSNLALKQF NKMQLLLAEA IKDGDIPKHQ AEALQAEMGF MLQRLENLQK LWKMMAKEDS NKGAPMARWI ELITGKQVDY LFSASPIEVG FMLESMLWQK AAGVVLCSAT LRALNNFDHF AHQVGLSVKD GSRYLALQSP FDYPNNATLY LPKMRTEPTD DAYTAELAEQ IIELIEGEMA TLVLFASYWQ MEKVAELLEG KLTQEILIQG NAPRQQLLET HKAKCDKGEP SILFGTGSFS EGLDLPGDYL TNLIVTKLPF AVPTSPVEQA HAEYVKIKGG NPFLQLTIPD ASRKLIQSCG RLLRKEQDYG RVTILDRRLV TKRYGKSLLD ALPPFRRVIE
|
| |