Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2521 |
Symbol | |
ID | 4257597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2980300 |
End bp | 2981070 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123196 |
Product | hypothetical protein |
Protein accession | YP_738563 |
Protein GI | 114048013 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000101647 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000262337 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGAATTTG AACTGACTCT ACAAATTGCG GCATTACTCT TTGGCGTGGC TATGGTGGCG GGGTTTATCG ACTCTATCGC CGGCGGCGGG GGATTGCTGA CTATCCCTGC GTTAATGTGG GCGGGTTTAC CGCCGGCGGT AGCGCTCGGG ACCAACAAAT TACAGGCCTG CGGTGGCAGT TTTTTTGCGA GCTTGTACTT TGTGCGTAAG GGATTAGTTG ATTTGAAGGC CGTTAAACTG TCCCTTATCT GTGCCTTTGC GGGCGCTGCC TTAGGCACTA TTCTGGTGCA GTTGGTCGAT GCTAAAGTGC TGGAGTTAGT CTTACCTTTT TTAATCCTCG CGATTGGTTG TTATTTCTTG TTTTCGAAAA AGATTTCGGA AGATGACCGC CACCAAGTAT TAACACCTAC CGTCTTTGCC TTTACCGCCG CGCTCGGTGT GGGTTTGTAT GATGGCTTTT TTGGCCCAGG CACAGGGAGT TTCTTCGCGC TGGCCTTTGT GACCTTGGCC GGTTTTGGTC TGGCAAAGGC GACGGCACAC GCCAAGGTGT TAAACTTCTC GACCAATATT GCTTCGCTTA TCTTCTTCAC CTTAGGTGGC AAAGTGATTT GGGTGCTCGG TTTAGTGATG CTTGCTGGTC AGGCTATCGG CGCCACCTTA GGTTCGCGCT TAGTCGTGAC CAAGGGCACT AAGATCATTA AGCCATTAGT GGTGACTATG TCCTTGGCCA TGAGTGTGAA GCAGCTAGCC AGCCAATATC ACCTGTTTTG A
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Protein sequence | MEFELTLQIA ALLFGVAMVA GFIDSIAGGG GLLTIPALMW AGLPPAVALG TNKLQACGGS FFASLYFVRK GLVDLKAVKL SLICAFAGAA LGTILVQLVD AKVLELVLPF LILAIGCYFL FSKKISEDDR HQVLTPTVFA FTAALGVGLY DGFFGPGTGS FFALAFVTLA GFGLAKATAH AKVLNFSTNI ASLIFFTLGG KVIWVLGLVM LAGQAIGATL GSRLVVTKGT KIIKPLVVTM SLAMSVKQLA SQYHLF
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