Gene Shewmr7_2521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2521 
Symbol 
ID4257597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2980300 
End bp2981070 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID638123196 
Producthypothetical protein 
Protein accessionYP_738563 
Protein GI114048013 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000101647 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000262337 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAATTTG AACTGACTCT ACAAATTGCG GCATTACTCT TTGGCGTGGC TATGGTGGCG 
GGGTTTATCG ACTCTATCGC CGGCGGCGGG GGATTGCTGA CTATCCCTGC GTTAATGTGG
GCGGGTTTAC CGCCGGCGGT AGCGCTCGGG ACCAACAAAT TACAGGCCTG CGGTGGCAGT
TTTTTTGCGA GCTTGTACTT TGTGCGTAAG GGATTAGTTG ATTTGAAGGC CGTTAAACTG
TCCCTTATCT GTGCCTTTGC GGGCGCTGCC TTAGGCACTA TTCTGGTGCA GTTGGTCGAT
GCTAAAGTGC TGGAGTTAGT CTTACCTTTT TTAATCCTCG CGATTGGTTG TTATTTCTTG
TTTTCGAAAA AGATTTCGGA AGATGACCGC CACCAAGTAT TAACACCTAC CGTCTTTGCC
TTTACCGCCG CGCTCGGTGT GGGTTTGTAT GATGGCTTTT TTGGCCCAGG CACAGGGAGT
TTCTTCGCGC TGGCCTTTGT GACCTTGGCC GGTTTTGGTC TGGCAAAGGC GACGGCACAC
GCCAAGGTGT TAAACTTCTC GACCAATATT GCTTCGCTTA TCTTCTTCAC CTTAGGTGGC
AAAGTGATTT GGGTGCTCGG TTTAGTGATG CTTGCTGGTC AGGCTATCGG CGCCACCTTA
GGTTCGCGCT TAGTCGTGAC CAAGGGCACT AAGATCATTA AGCCATTAGT GGTGACTATG
TCCTTGGCCA TGAGTGTGAA GCAGCTAGCC AGCCAATATC ACCTGTTTTG A
 
Protein sequence
MEFELTLQIA ALLFGVAMVA GFIDSIAGGG GLLTIPALMW AGLPPAVALG TNKLQACGGS 
FFASLYFVRK GLVDLKAVKL SLICAFAGAA LGTILVQLVD AKVLELVLPF LILAIGCYFL
FSKKISEDDR HQVLTPTVFA FTAALGVGLY DGFFGPGTGS FFALAFVTLA GFGLAKATAH
AKVLNFSTNI ASLIFFTLGG KVIWVLGLVM LAGQAIGATL GSRLVVTKGT KIIKPLVVTM
SLAMSVKQLA SQYHLF