Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2518 |
Symbol | |
ID | 4257594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2974201 |
End bp | 2975496 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638123193 |
Product | peptidase M23B |
Protein accession | YP_738560 |
Protein GI | 114048010 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0290484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000200771 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | TTGCAGACAG GTAAACCCAA TTTGGCTAAT TTTCCGCAAA TTCGTTTGCA GAACTTATCT TCAGCCCAGA AAAATATTCT CCTTGTTGGA GGTCTATTAA TCGGTGCGGC GATGTTAATG CCGAATGCTA ATCATGTGGT ACCTACTGCT CAACGTATTC CCGTCGCGCT CGATATTGAG ACTATATTGC CACAGATATC AGAGCCTGTA GAAACCGCTC CGATTGTCGA TAATACCCCG CATTTTGAAC GCGTCATCGC CTCTGGTGAT ACTTTAAGCG CTTTATTTTC TAAGGCGGGT GTCGATCAGC AAACCATGTA TAAGGTATTA GAAGCCGATT TAAACATTCT GGCGCTAGAT ACCTTATTAC CCGGTAACCG TATTCAATTT TGGCTGGATA ATGAAGGCCA ACTGCAAAAG TTAGAACTGT ATTTTAATGC CGCGCGCCAA GTGGTATTTA CTCGTTATGA AGATGGCAGC TTTAACGTTG AAGAAATTAA CGTTGAAGGT GTGTGGCAAA ACCGTATTCT CACTGGCGAT ATTAAAGGCT CATTCTACGT TTCGGCGCAA AAAATGGGTT TAGCAGCGGC CGATATTCAG CGGATTGAAG ATTTACTCAA AGAGAAAGTG AATTTCGCAC GAGATCTACG TGCAGGTGAT AAATTTTCTG TTTTGGTAAA TGATCAATAT GTTGAGGGCG AAGCAACCGG AAGCAGCCAA ATATTAGGCG TAAGCATTAA AACGGGTCGC TCAGAAATTA GTGCATTCCA ACATACCGAT GGCAGTTATT ACGATGCTAA AGGCCAAAGC TTAGTGCGAG CCTTCCAACG TATTCCATTG GCTAAACAGC CACGAATGAG TTCTCGTTTT AACCCGACGC GTAAACATCC TATTACTGGC CGCATTTCTC CCCATAATGG TACCGACTTT TCAGTACCTA TTGGCACTAA AGTTATTGCT CCAGGCGATG GTGTCGTAAG CTTAGTCACC GATCACCAAT TCGCGGGTAA ATATATTGTG ATTGAACACG GTGGTAAGTA CCGTACACGT TATTTACACC TTTCTAAAGC GTTAGTGCGT AAAGGTCAGA GAGTGACTCG TGGCCAAGTG ATTGCTTTAT CGGGCAATAC TGGACGTTCT ACCGGTCCAC ATTTGCATTA TGAATTCCAT GTTAACGGCA GACCTGTGGA CCCAATGAGA GCCGATATCC CGATGGCGAG CCAATTAGCG AATCAAGAAT TACGTACTTT CACCAATATC GTGAAGAGCC GCCAAGCGTT AATGAACTTA GGTTAA
|
Protein sequence | MQTGKPNLAN FPQIRLQNLS SAQKNILLVG GLLIGAAMLM PNANHVVPTA QRIPVALDIE TILPQISEPV ETAPIVDNTP HFERVIASGD TLSALFSKAG VDQQTMYKVL EADLNILALD TLLPGNRIQF WLDNEGQLQK LELYFNAARQ VVFTRYEDGS FNVEEINVEG VWQNRILTGD IKGSFYVSAQ KMGLAAADIQ RIEDLLKEKV NFARDLRAGD KFSVLVNDQY VEGEATGSSQ ILGVSIKTGR SEISAFQHTD GSYYDAKGQS LVRAFQRIPL AKQPRMSSRF NPTRKHPITG RISPHNGTDF SVPIGTKVIA PGDGVVSLVT DHQFAGKYIV IEHGGKYRTR YLHLSKALVR KGQRVTRGQV IALSGNTGRS TGPHLHYEFH VNGRPVDPMR ADIPMASQLA NQELRTFTNI VKSRQALMNL G
|
| |