| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2441 |
|---|
| Symbol | |
|---|
| ID | 4255767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2891753 |
|---|
| End bp | 2892775 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123116 |
|---|
| Product | TolA family protein |
|---|
| Protein accession | YP_738483 |
|---|
| Protein GI | 114047933 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3064] Membrane protein involved in colicin uptake |
|---|
| TIGRFAM ID | [TIGR02794] TolA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000397376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.24522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGATA ATTCAAATGT TGCATTACCT CTGTCAATTT CAGCAGGTAT TCATATTGGC
GTGATAATTA TTCTGGCCAT TGGCATAGAT TTCACCCATA AACCTGAACC TGTGCAACAA
GTTAGCGCCC CTGCAGTAAA AGCTGTTATG GTTGATCAGC AAAAAGTGGC TAATCAAGTT
GAAAAGCTTA AGCAGGAAAA GCGCGATACT GAGCGCCGCG AACGTGAGCG CCAAGCCGAA
CTTGAACGCA AGGCACAGGA AGCAAAGCAA GCCCGTGAGC GTGAACAAGC ACAGCTGAAA
AAGCTGGCTG AAGAACGTAA GCAGCAGGAA ATTGAGACCC AAAAGGCCAA TGATGCCGCG
AAAGCCGCGC AGGTGAAGCA GCAACAGGAA AAGGAAAAAG CGCAAAAAGC CGAAGCCGAT
CGCAAGCAGA AGGAGCAAGA ACGTAAACTT GCTGAAGATG CTGCTCAAAA AGCGGCGGAA
AAACGCAAAG TAGAAGAGGC CGCAGCCGCG AAAGCAGAGG CCGATCGTAA GCAGAAGGAA
GCCGAAGCCA AGGCAAAAGC AGAGGCTGAT GCTAAGGCCA AAGCGGAGGC AAAAGCCAAG
GCCGATGCAG AAGCGAAAGC AAAAGCTGCA GCTAAGGCAA AAGCCGATGC CGAAGCCAAA
GCGCGTGCCC AGCAAGAGCA GGAAATGGCC GATGCGTTAG CCGCCGAGCA GGCTGCGTTA
TCGCAAACCA TGAATAAGCA AATGCAGACG GAAGTGGGTA AATACACCGC GATGATTAAA
TCGACGATTC AACGCAACCT AGTGGTTGAC GAGTCGATGC GTGGTAAAAC CTGTACTGTT
TCTGTGCGTT TAGCCAATGA TGGTTTTGTG ATCAGCAGTC AGACACAGGG TGGCGATCCT
AATGTGTGCC GTGCAGCAAA AGCGGCGATC TTAAAGGCGG GCAAGTTACC AGTGTCTCCG
GATCCTGCAG TTTATAACTT GATGAAAGAA ATTAACTTAA TCGTTGAACC AACGTTTAAT
TAA
|
|---|
| Protein sequence | MADNSNVALP LSISAGIHIG VIIILAIGID FTHKPEPVQQ VSAPAVKAVM VDQQKVANQV
EKLKQEKRDT ERRERERQAE LERKAQEAKQ AREREQAQLK KLAEERKQQE IETQKANDAA
KAAQVKQQQE KEKAQKAEAD RKQKEQERKL AEDAAQKAAE KRKVEEAAAA KAEADRKQKE
AEAKAKAEAD AKAKAEAKAK ADAEAKAKAA AKAKADAEAK ARAQQEQEMA DALAAEQAAL
SQTMNKQMQT EVGKYTAMIK STIQRNLVVD ESMRGKTCTV SVRLANDGFV ISSQTQGGDP
NVCRAAKAAI LKAGKLPVSP DPAVYNLMKE INLIVEPTFN
|
|---|
| |