| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2380 |
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| Symbol | |
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| ID | 4256760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2820134 |
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| End bp | 2822380 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638123050 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_738424 |
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| Protein GI | 114047874 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.357323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA AAAAGTCTAC CAAGAGTTCC ACCTTCTCCT TATCGTTAAC GCGTGCGCCA
TTGGCGCTGG CCATTTCGGC GGCGTTAAGC ACAGCCGCGT GGGCGCAAAC TGATGCTATC
GATAAACCTG ATCCAAGCAA TGATATGGAA ATCATGGTGG TGACTGCAGA TTTTCGCAGT
GCCAGTTTAG AGAAAATGCC ATCGAGCATT ACCGTTATCG ATGCCCAGCA AATTCAAGAT
GAAAGTGCCC AGCACTTTGA AGACGTGATG AATTCTATCG CCAACTTTAA CTGGTCGGGT
GGCAGCTCAC GTCCTAAGTA TTTCCAGATC CGTGGCGTAG GGGAGCAGGA GCAATATCAA
GGTGCCCCTA ACTCATCTGT GGGTTATATC ATTGATGATA TTGATTTATC TGGTATCGGC
ATGGTGTCGA GCATGTACGA TCTGCAGCAG GTCGAAGTGT TACGCGGCCC GCAGGGAACC
CGCTATGGCG CCAATGCGTT AGCAGGCTTG ATTTACCTAA AGAGCAATGA TCCGACCGAT
GTGTTTGAAC ATGGCGCCGA GGTCTCTTTA GGCAATGACG ATTTGCAAAC CTTCAGTGGT
TTTAGTTCTG GCCCCTTAAC CGATTCGGGC AAATTGTTAT ACCGCGTGTC GCTGCAGCAA
CATCAACAAA ACGGTTATCG CGATAATCTC TATATAAATA AAGAAGATAC CAATGGTCGT
GATGAATTTA CTGGCCGCGC TAAATTACGC TGGTATGCCA CCGATAATCT GCAACTCGAT
TTAACTCTGC TGCATGCTGA TTTTGATAAC GGCTACGATG CCTGGAGTTT AACCAACGAT
CCTAAACATA CTATTTCGGA TCAGCCGGGT GTCGATAGCC AGCGCACCAC GGGCGCAGGA
TTTAAAGCAA CTTACTCGGG CGCTGAGTCG TTTGAGTTAA CCTCGCTGAC TTCATTTGCC
AATACCGATC ACCATTATAG TTACGATGGT GATTGGGCTA ACCCTGAATA TTGGGCCTCC
AAGCAATGTG ATATTTATGA TGCGGATTGG AATTCAATCG GAAAGTTACC TTGTGTTTAT
GATGCAACAT GGTCAAAAGT GGGTCAGAGA AAAACGTTTA CACAAGAATT ACGTCTTACT
TCAAGTGATG CTGGAAGAAT ATTTAACGAG TCTACAGATT GGTTAATTGG AGTTTACTTT
TCGAGTTTGC AGGAAGACAA CAGTCTGATC GACTATGCCA AATATAGTAA TGGTGGTTTG
AATCCCAGTT TTAAAGAAAG AACTAAATAT TTAGACTCAA CATATGATGC GCAAAATTAC
GCAATATTTG GTCAACTCGA TATTGATATG AGTAATGATT ATTTATTGTC ACTTGGACTG
AGGTTAGAGA ATCGCTCGAG TGATTATAGC GATACAAATC TGGATGATTT TTCACCATCA
GAAACAATGT GGGGTGGTCA TCTTGCTTTA AGTAAAGCAC TTAGTGAACA GCATAATGCT
TACATTCGAG TTGCTAGAGG ATATAAAGCG GGTGGTTTTA ATATGACGCT TCCTGCTGAT
TTCAGCGATA AAAAGGAGTT TAATACTGAA ACTTTATATA ACTATGAATT AGGTCTTAAA
TCTTCATGGT TATCAGGAGC GTTAAGTACA AATGTTGCTC TTTTTTATAT GGATAGACAA
GACCAACAAG TATCTGCATC TCAACAAAAT CCTGAAGATT TAAGTGAGTT TGTTCTTTTT
ATCGATAATG CTGGAAGTTC AAAAAACTAT GGCTTAGAGA TTGATGCTAA TTGGTATATC
GACAGTAATT GGCATTTATA TTCTAGCGTT GGTTACTTAA ATACTGCGTA TGGCGATTAT
CAATACGAAG TAGCTGAAGA CCAGTTTGTG GATTTAACGG GCCGCGATTT GGCCCATTCG
CCACACTTAA CCTACAGCTT AGGCGGCACC TATCGTGCGA ACTCGGGTTG GTTTGCCAAC
GTCAATATGA GTGGTAAGAG TGAGTTTTAC TACTCAGACA GCAACGACTC GCGCTCTGAG
CCATACACAA TTGTGAATGC GCGTTTAGGT TATGAGGCGA GTGCTTGGTC GGCGTATTTA
TGGGGCCGCA ACCTGTTCGA TGAAGAATAT GGTGTGCGTG GTTTCTATTT TGGCAATGAG
CCGGATAACG GCTGGGCGGA AAAGCAATAT ATCCGCTACG GCGACCCACG CCAAATCGGG
GTTACACTAA ACGTTAAGTT TATGTAA
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| Protein sequence | MSNKKSTKSS TFSLSLTRAP LALAISAALS TAAWAQTDAI DKPDPSNDME IMVVTADFRS
ASLEKMPSSI TVIDAQQIQD ESAQHFEDVM NSIANFNWSG GSSRPKYFQI RGVGEQEQYQ
GAPNSSVGYI IDDIDLSGIG MVSSMYDLQQ VEVLRGPQGT RYGANALAGL IYLKSNDPTD
VFEHGAEVSL GNDDLQTFSG FSSGPLTDSG KLLYRVSLQQ HQQNGYRDNL YINKEDTNGR
DEFTGRAKLR WYATDNLQLD LTLLHADFDN GYDAWSLTND PKHTISDQPG VDSQRTTGAG
FKATYSGAES FELTSLTSFA NTDHHYSYDG DWANPEYWAS KQCDIYDADW NSIGKLPCVY
DATWSKVGQR KTFTQELRLT SSDAGRIFNE STDWLIGVYF SSLQEDNSLI DYAKYSNGGL
NPSFKERTKY LDSTYDAQNY AIFGQLDIDM SNDYLLSLGL RLENRSSDYS DTNLDDFSPS
ETMWGGHLAL SKALSEQHNA YIRVARGYKA GGFNMTLPAD FSDKKEFNTE TLYNYELGLK
SSWLSGALST NVALFYMDRQ DQQVSASQQN PEDLSEFVLF IDNAGSSKNY GLEIDANWYI
DSNWHLYSSV GYLNTAYGDY QYEVAEDQFV DLTGRDLAHS PHLTYSLGGT YRANSGWFAN
VNMSGKSEFY YSDSNDSRSE PYTIVNARLG YEASAWSAYL WGRNLFDEEY GVRGFYFGNE
PDNGWAEKQY IRYGDPRQIG VTLNVKFM
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