| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2347 |
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| Symbol | |
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| ID | 4256953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2786457 |
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| End bp | 2787125 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638123017 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_738391 |
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| Protein GI | 114047841 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.51526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0659937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATT TTCAATCACA TTTAGCGCAA AATCGCTATG ATAGGCAGTT ATCATCCCCT
ATCGATATGG CTATGGAAAA CGATAGCACT ATTTCAACTG CTAATGAGCC AATCACAGAT
GCGGATCCTT TGACGCGAGC CATTATAAGA GTCGCGAATC AACGGGATAA AGCCGCCTTT
GCGGAATTGT TCAGCCATTT TATGCCCAAA ATTCGCGCAT TCGGTCTGCA ACGCTTAAAT
CAGCAAGGGC TGGCCATGGA TCTGGTGCAA GAAACCATGA CCTTAGTATG GACCAAAGCC
CATTTGTACA ATGCCGACAA AGGCTCGGTG GCGACTTGGG TATTTACCAT TATGCGCAAC
CAGTGTTTCG ACATGCTTAG GCGCATCCAA CATAACCGTG AAGATGCCTT CGGAGATGAT
ATTTGGCCTA TTTACGATGT GGCCGTCAGT CAAGAAGGCG GCCCAGATCA TAAACTCACC
GCCAAGCTAC TCGCGCACTT AGATGCTCTA CCCCTGCCCC AACGCCAAGT GGTTCAAGGG
ATCTATATGC AAGAACTCAC GCAACAAGAA TTAGCCGATG CCTTAAAAGT CCCGATTGGT
ACGATAAAAT CGCGACTCAG ATTGGGGTTA GAAAAGCTGA AAAGCTTTTT GGAGACGCAA
CATGATTAA
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| Protein sequence | MENFQSHLAQ NRYDRQLSSP IDMAMENDST ISTANEPITD ADPLTRAIIR VANQRDKAAF
AELFSHFMPK IRAFGLQRLN QQGLAMDLVQ ETMTLVWTKA HLYNADKGSV ATWVFTIMRN
QCFDMLRRIQ HNREDAFGDD IWPIYDVAVS QEGGPDHKLT AKLLAHLDAL PLPQRQVVQG
IYMQELTQQE LADALKVPIG TIKSRLRLGL EKLKSFLETQ HD
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